CAZyme Information

Basic Information
SpeciesLinum usitatissimum
Cazyme IDLus10005172
FamilyGH18
Protein PropertiesLength: 286 Molecular Weight: 30915.9 Isoelectric Point: 6.0259
ChromosomeChromosome/Scaffold: 485 Start: 78658 End: 79515
Description
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18211868.1e-24
  PGINFHFILGFAIDADSSGNPTNGKFSPYWADTLTPESISSIKSRHPNLKVMLSLGGWSDPGGKVLRWIPPKSRSLWISNAVSSLTSLISTYHLDGVDVD
  YETFGRGNADLDSFAVCIGELISRLKKAQLISVATIAPFHSTVAPYVALFRKYGGFVDYVNYQFYT
Full Sequence
Protein Sequence     Length: 286     Download
MMEYIGATGA PVTFDSVPIK PGINFHFILG FAIDADSSGN PTNGKFSPYW ADTLTPESIS    60
SIKSRHPNLK VMLSLGGWSD PGGKVLRWIP PKSRSLWISN AVSSLTSLIS TYHLDGVDVD    120
YETFGRGNAD LDSFAVCIGE LISRLKKAQL ISVATIAPFH STVAPYVALF RKYGGFVDYV    180
NYQFYTDKVR HPAAYVEAFG VRVEEFGKEK VLPSYEVNGR GIQGDGFFDS LSLLVKKGFC    240
VNGVMIFSAD ASEGDNGGGG DGKFYYENKS QAFLLNSTTN AGCSE* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06548GH18_chitinase2.0e-826122113+
smart00636Glyco_188.0e-1626186172+
pfam00704Glyco_hydro_184.0e-1726185167+
cd00598GH18_chitinase-like2.0e-171185190+
cd06544GH18_narbonin8.0e-961252258+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN65355.101278143409hypothetical protein [Vitis vinifera]
RefSeqXP_002274616.10127867333PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002321722.1032745271predicted protein [Populus trichocarpa]
RefSeqXP_002328469.1022791267predicted protein [Populus trichocarpa]
RefSeqXP_002517257.1012791268Chitinase 1 precursor, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B012753274A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A012753274A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A1e-2632527266A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB1zbc_A0.000021918525188A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB1zb5_A0.000021918525188A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JG18611919011900
DY83128627022710
CO16532328332740
FQ31649227852740
FQ31686827852740
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna17899.1-v1.0-hybrid
mrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Malus domesticaMDP0000904158MDP0000885802MDP0000644797MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny