| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006727m |
| Family | GT4 |
| Protein Properties | Length: 478 Molecular Weight: 53518.4 Isoelectric Point: 10.0102 |
| Chromosome | Chromosome/Scaffold: 09657 Start: 60935 End: 65052 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 281 | 444 | 5.3e-22 |
| LLFAIINSVSRGKGQDLFLRSFYESLQLIQEKKLQVPSLHAVVVGSDMNVQTKFETELRKFVQEKKIQNCVHFINKTLTVAPYLASIDVLVQNSQARGEC FGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPVGKGGITPLANNIVKLATHVERRLTMG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 478 Download |
| MGKQSSSWIT MHKKRWPLMI FALFTLSTVM VFFMRSAFDS CHSTPSGTDN HFREANEVQK 60 APIHSVSQSQ TPSIAPNPLY FMKSKLVLLV SHELSLSGGP LLLMELAFLL RGVGAQVIWI 120 TNQKPAEPDE VIYSLEHKML DRGVQVLPAK GQSAIDTALK ADLVVLNTAV AGKWLDAVLK 180 ENVQQVLPKV LWWIHEMRGH YFKLEYVKHL PFVAGAMIDS HTTADYWKNR TKERLGIRMP 240 ETYVVHLGNS KDLMEVAEDT VAKRALREHV RESLGVRNDD LLFAIINSVS RGKGQDLFLR 300 SFYESLQLIQ EKKLQVPSLH AVVVGSDMNV QTKFETELRK FVQEKKIQNC VHFINKTLTV 360 APYLASIDVL VQNSQARGEC FGRITIEAMA FQLPVLGTAA GGTMEIVVNG TTGLLHPVGK 420 GGITPLANNI VKLATHVERR LTMGKKGYER VKENFLEHHM SHRIALVLKE VLKKAKS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0438 | RfaG | 2.0e-16 | 101 | 464 | 379 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| cd03819 | GT1_WavL_like | 3.0e-17 | 262 | 460 | 200 | + This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. | ||
| cd03798 | GT1_wlbH_like | 1.0e-17 | 271 | 464 | 198 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03808 | GT1_cap1E_like | 1.0e-21 | 234 | 460 | 228 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
| cd03801 | GT1_YqgM_like | 2.0e-29 | 98 | 464 | 383 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN73426.1 | 0 | 1 | 472 | 1 | 470 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI19755.1 | 0 | 1 | 477 | 1 | 459 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002281084.1 | 0 | 1 | 477 | 1 | 475 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327680.1 | 0 | 13 | 477 | 20 | 477 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510442.1 | 0 | 1 | 477 | 1 | 477 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jjm_L | 0.0000000005 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_K | 0.0000000005 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_J | 0.0000000005 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_I | 0.0000000005 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_H | 0.0000000005 | 340 | 477 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
