Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 480865 |
Family | GT47 |
Protein Properties | Length: 601 Molecular Weight: 68591 Isoelectric Point: 7.4716 |
Chromosome | Chromosome/Scaffold: 3 Start: 23834273 End: 23836682 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 134 | 473 | 0 |
GKYIYVHDLPSKFNEDMLRDCKKLSLWTNMCKFTTNAGLGPPLENVEGVFSDEGWYATNQFAVDVIFSNRMKQYKCLTNDSSLAAAIFVPFYAGFDIARY LWGYNISRRDAASLELVNWLMKRPEWDIMRGKDHFLVAGRITWDFRRLSEEETDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDSEVF EWQDRMKNLERKWLFSFAGAPRPDNPKSIRGQIIDQCRNSNVGKLLECDFGESKCHAPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPG SAYTQYTWHLPKNYTTYSVFIPEDDIRKRNISIEERLLQI |
Full Sequence |
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Protein Sequence Length: 601 Download |
MEKGNGKNQT NRICLLVALS LFFWALLLYF HFVVLGSSNI DKQIQLQPSY AQSQPSSISL 60 RVDKFPLEPH AAPSKPPPKD PLVTIDKPVL SPAPVANSTT TFKPPRIVES RQKQEFSFIR 120 ALKTVDNKSD PCGGKYIYVH DLPSKFNEDM LRDCKKLSLW TNMCKFTTNA GLGPPLENVE 180 GVFSDEGWYA TNQFAVDVIF SNRMKQYKCL TNDSSLAAAI FVPFYAGFDI ARYLWGYNIS 240 RRDAASLELV NWLMKRPEWD IMRGKDHFLV AGRITWDFRR LSEEETDWGN KLLFLPAAKN 300 MSMLVVESSP WNANDFGIPY PTYFHPAKDS EVFEWQDRMK NLERKWLFSF AGAPRPDNPK 360 SIRGQIIDQC RNSNVGKLLE CDFGESKCHA PSSIMQMFQS SLFCLQPQGD SYTRRSAFDS 420 MLAGCIPVFF HPGSAYTQYT WHLPKNYTTY SVFIPEDDIR KRNISIEERL LQIPHEQVKI 480 MRENVINLIP RLIYADPRSE LETQKDAFDV SVQAVIDKVT RLRKNMIEGR TEYDNFVEEN 540 SWKYALLEEG QREAGGHVWD PFFSKPKPGE DGGSDGNGGT TISADAAKNS WKSEQRDKTQ 600 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-70 | 131 | 473 | 358 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |