Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os10g32170.1 |
Family | GT47 |
Protein Properties | Length: 621 Molecular Weight: 67574 Isoelectric Point: 6.9948 |
Chromosome | Chromosome/Scaffold: 10 Start: 16896684 End: 16898801 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 186 | 528 | 0 |
CGGRYVYVQELPPRFNTDMVKNCATLFPWTDMCAFTANGGFGPQMSGGDGGVFQETGWYNSDQYTVDIIFHDRIRRYECLTDDPSLAAAVYVPFFAGLEV ARHLWGFNVTTRDAMALEVVDIITSRSEWRAMGGRDHFFTAGRTTWDFRRLNDGDAGWGSKLFSLPAIKNMTALVVEASPWHLNDAAIPFPTAFHPASDE AVFVWQDKVRRLERPWLFSFAGAARPGSAKSIRSELIAQCRASSVCSLMECADGPSNKCGSPASYMRLFQSSTFCLQPQGDSYTRKSAFDAMLAGCIPVF FHPGTAYVQYTWHLPRNHADYSVYISEDDVRRNASIEERLRRI |
Full Sequence |
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Protein Sequence Length: 621 Download |
MKRHNTAEVP VPVSYGGKVE KTMGGAKQGR GGGGGCCSRL WFMVVLSATV TLLVRHCYDS 60 GVIGHGAAAG GVVRIEPVHR GLYHTRKASP VDRGGGGGGT SFSGHSPSPP DAGGSAKPES 120 PHDSGVKAPS ELTTVEHTKQ PSEPASTGTE SDDGGKPSSA SSSSLPAAAH PFARALAAAG 180 DKGDRCGGRY VYVQELPPRF NTDMVKNCAT LFPWTDMCAF TANGGFGPQM SGGDGGVFQE 240 TGWYNSDQYT VDIIFHDRIR RYECLTDDPS LAAAVYVPFF AGLEVARHLW GFNVTTRDAM 300 ALEVVDIITS RSEWRAMGGR DHFFTAGRTT WDFRRLNDGD AGWGSKLFSL PAIKNMTALV 360 VEASPWHLND AAIPFPTAFH PASDEAVFVW QDKVRRLERP WLFSFAGAAR PGSAKSIRSE 420 LIAQCRASSV CSLMECADGP SNKCGSPASY MRLFQSSTFC LQPQGDSYTR KSAFDAMLAG 480 CIPVFFHPGT AYVQYTWHLP RNHADYSVYI SEDDVRRNAS IEERLRRIAP AAVERMRETV 540 ISLIPTVVYA QPSSRLDTMK DAFDVAVDAI VDKVTRLRRD IVDGRGEEEK LEMYSWKYPL 600 LREGQKVEDP HEWDPLFAFG * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 7.0e-66 | 185 | 528 | 361 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005794 | Golgi apparatus |
GO:0005975 | carbohydrate metabolic process |
GO:0007165 | signal transduction |
GO:0008152 | metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM93699.1 | 0 | 23 | 620 | 1 | 598 | hypothetical protein [Oryza sativa Japonica Group] |
GenBank | EEC67107.1 | 0 | 1 | 620 | 1 | 617 | hypothetical protein OsI_33904 [Oryza sativa Indica Group] |
GenBank | EEE51089.1 | 0 | 1 | 620 | 1 | 586 | hypothetical protein OsJ_31792 [Oryza sativa Japonica Group] |
RefSeq | NP_001064770.1 | 0 | 1 | 620 | 1 | 591 | Os10g0459600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001064771.1 | 0 | 1 | 620 | 1 | 620 | Os10g0459700 [Oryza sativa (japonica cultivar-group)] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG636298 | 261 | 258 | 518 | 0 |
EL456596 | 272 | 231 | 502 | 0 |
CX076275 | 262 | 261 | 521 | 0 |
EE075461 | 255 | 293 | 546 | 0 |
FL739554 | 253 | 294 | 545 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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