Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os10g32110.1 |
Family | GT47 |
Protein Properties | Length: 469 Molecular Weight: 52121.2 Isoelectric Point: 8.2111 |
Chromosome | Chromosome/Scaffold: 10 Start: 16861659 End: 16863255 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 66 | 410 | 0 |
CAGRYIYMYDMPARFNEELLRDCRALRPWTAEGMCRYVANGGMGEPMGGDGGGIFSERGWFDTDQFVLDIIFHGRMKRYGCLTGDPAAAAAVFVPFYGSC DLGRHIFHRNASVKDALSEDLVGWLTRRSEWRAMGGRDHFFVAGRTTWDFRRERDEGWEWGSKLLNYPAVQNMTAILVEASPWSRNNLAVPYPTYFHPET AADVAAWQRRVRAAARPWLFSFAGGPRKGNGTIRADIIRQCGASSRCNLFHCHGAAASGCNAPGAVMRVFESSRFCLEPRGDTMTRRSTFDAILAGCIPV FFHPGSAYTQYTLHLPPERGGWSVLIPHADVTGRNVSIEETLAAI |
Full Sequence |
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Protein Sequence Length: 469 Download |
MAILSAVFWF LVFSLLSGMP GGGDLSSVLF RPSSLSLPLL NSFTFDQNPS PEQQPPPAPA 60 PAEDRCAGRY IYMYDMPARF NEELLRDCRA LRPWTAEGMC RYVANGGMGE PMGGDGGGIF 120 SERGWFDTDQ FVLDIIFHGR MKRYGCLTGD PAAAAAVFVP FYGSCDLGRH IFHRNASVKD 180 ALSEDLVGWL TRRSEWRAMG GRDHFFVAGR TTWDFRRERD EGWEWGSKLL NYPAVQNMTA 240 ILVEASPWSR NNLAVPYPTY FHPETAADVA AWQRRVRAAA RPWLFSFAGG PRKGNGTIRA 300 DIIRQCGASS RCNLFHCHGA AASGCNAPGA VMRVFESSRF CLEPRGDTMT RRSTFDAILA 360 GCIPVFFHPG SAYTQYTLHL PPERGGWSVL IPHADVTGRN VSIEETLAAI SPEKVRSMRE 420 EVIRLIPTVV YADTRSSRVD FRDAFDVAVD AVVGRVARRR RDEPDARR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-54 | 65 | 410 | 362 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005794 | Golgi apparatus |
GO:0005975 | carbohydrate metabolic process |
GO:0007165 | signal transduction |
GO:0008152 | metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK54285.1 | 0 | 22 | 468 | 22 | 468 | AC034258_3 hypothetical protein [Oryza sativa Japonica Group] |
DDBJ | BAH94918.1 | 0 | 22 | 468 | 53 | 499 | Os10g0459300 [Oryza sativa Japonica Group] |
RefSeq | NP_001150032.1 | 0 | 64 | 461 | 56 | 455 | xyloglucan galactosyltransferase KATAMARI 1 [Zea mays] |
RefSeq | XP_002464524.1 | 0 | 25 | 467 | 46 | 489 | hypothetical protein SORBIDRAFT_01g020080 [Sorghum bicolor] |
RefSeq | XP_002468517.1 | 0 | 64 | 462 | 137 | 532 | hypothetical protein SORBIDRAFT_01g047270 [Sorghum bicolor] |