Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr5g095940.1 |
Family | GT47 |
Protein Properties | Length: 497 Molecular Weight: 57523.3 Isoelectric Point: 8.6755 |
Chromosome | Chromosome/Scaffold: 5 Start: 40903101 End: 40904591 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 97 | 438 | 0 |
QYIYVYDLPARFNEDLLKGCHSLQKWENMCVYLSNLGVGPKIIEKTKKKVLSKKSWYATNQFSLEVIFHNTMKHYKCLTNDSSLASAIYIPYYAGLDAGQ YLWEFNISMIDKSPNEFVKWLAQQSQWKRLHGKDHFMVGGRIGCDFRREGDLDDDFGTKLMSLPELSNVSFLLIESCKGLYDNEFPIPYPTYFHPTNDDE IFNWQRKMRDRKRNYLFSFVGAPRPNSTSSIRNELIKHCESSKSCKFVRCYHGSSKKKSCRDPVQVMDNFQNSVFCLQPVGDSFTRRSIFDSILAGCIPV FLHPLSAYKQYLWHFPKNGSSYSVFIPEIDVKEGRVMINETL |
Full Sequence |
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Protein Sequence Length: 497 Download |
MGMPMLMKYL VQFRYVFLIT ASIFFVSLLF LDYYQEIFAA PSTFSTICCG TNNQNNVTNE 60 ATSNDEGNRR TNPLIKHNVD EVFKKLPPKI MDPCLGQYIY VYDLPARFNE DLLKGCHSLQ 120 KWENMCVYLS NLGVGPKIIE KTKKKVLSKK SWYATNQFSL EVIFHNTMKH YKCLTNDSSL 180 ASAIYIPYYA GLDAGQYLWE FNISMIDKSP NEFVKWLAQQ SQWKRLHGKD HFMVGGRIGC 240 DFRREGDLDD DFGTKLMSLP ELSNVSFLLI ESCKGLYDNE FPIPYPTYFH PTNDDEIFNW 300 QRKMRDRKRN YLFSFVGAPR PNSTSSIRNE LIKHCESSKS CKFVRCYHGS SKKKSCRDPV 360 QVMDNFQNSV FCLQPVGDSF TRRSIFDSIL AGCIPVFLHP LSAYKQYLWH FPKNGSSYSV 420 FIPEIDVKEG RVMINETLFN VSKSEVLAMR EEVIRLIPRI VYRYPGSRLE TIEDAFDIAV 480 KGVLGRIEAM RRQIQM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-58 | 93 | 429 | 350 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002265362.1 | 0 | 81 | 492 | 60 | 467 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280815.1 | 0 | 92 | 495 | 91 | 488 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321098.1 | 0 | 92 | 494 | 48 | 445 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518609.1 | 0 | 76 | 495 | 58 | 471 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 15 | 492 | 15 | 499 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |