Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G224200.1 |
Family | GT47 |
Protein Properties | Length: 484 Molecular Weight: 56035.3 Isoelectric Point: 8.9873 |
Chromosome | Chromosome/Scaffold: 06 Start: 47613078 End: 47614693 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 87 | 428 | 0 |
CLGRYIYIHDLPERFNEDVIKDCQLITRSTDKYSMCKSLENSGLGPGIEALNASDLWKNSWFSTNQFMLEVIFHNRMKKYDCLTDDSALASAVFVPYYSG LDLRRYLWGFNTSMRDLSGIDLVAWLARKSEWKRNSGMDHFLISGRIARDFRRKSNRKSDWGSNFRLLPESENITMLTIETGYSKNDIAVPYPTYFHPAN DFQVHQWQEFLRKQNRPYLFSFAGARRSRQKGSIRAEIIDQCQASNKLCNFMDCSLFNQCDDPLNLMSLFRSSVFCLQPPGDSLTRRSTFDSILSGCIPV FFHPGSAYTQYVWHLPKDHNRYSVFISSKDLRVGKVTINQTL |
Full Sequence |
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Protein Sequence Length: 484 Download |
MKLHVLISEF CAGNPTKNIK WKNQPKRKYC SNHFCFVLFF PVVLFFMLLC FNHLFFENIK 60 GFVYFHGKST GSVTYFPGKL NETEDSCLGR YIYIHDLPER FNEDVIKDCQ LITRSTDKYS 120 MCKSLENSGL GPGIEALNAS DLWKNSWFST NQFMLEVIFH NRMKKYDCLT DDSALASAVF 180 VPYYSGLDLR RYLWGFNTSM RDLSGIDLVA WLARKSEWKR NSGMDHFLIS GRIARDFRRK 240 SNRKSDWGSN FRLLPESENI TMLTIETGYS KNDIAVPYPT YFHPANDFQV HQWQEFLRKQ 300 NRPYLFSFAG ARRSRQKGSI RAEIIDQCQA SNKLCNFMDC SLFNQCDDPL NLMSLFRSSV 360 FCLQPPGDSL TRRSTFDSIL SGCIPVFFHP GSAYTQYVWH LPKDHNRYSV FISSKDLRVG 420 KVTINQTLLQ VSKDEQLAMR EEVIKLIPGI VYGDPRSRLE TIDDAFDLAI NGILKRIKLL 480 TKN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-65 | 86 | 417 | 349 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180759.2 | 0 | 84 | 483 | 69 | 474 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | NP_193135.2 | 0 | 34 | 478 | 33 | 485 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002300146.1 | 0 | 27 | 482 | 13 | 490 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321098.1 | 0 | 55 | 483 | 18 | 444 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532518.1 | 0 | 27 | 482 | 7 | 499 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |