Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10004973m |
Family | GT47 |
Protein Properties | Length: 445 Molecular Weight: 51248.9 Isoelectric Point: 9.259 |
Chromosome | Chromosome/Scaffold: 9 Start: 17089382 End: 17090778 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 52 | 390 | 0 |
LGRYIYIHDLPKQFNEDVLENCQLITRKIDKYDTCMYTLNSGFGPRIENSNGILSNSTSWFITDHFFLEVIFHNRMKNYECLTNDSSLASAIYVPFYAGL DLRRHLWGFKPSVRDSSGKNLIKWLLEKPEWEKMRGLDHFLVSGRPSLDFRRQSNSKWGSMFRILPESQNMTMLSVDSQSWSNDLAIPYPTYFHPSKQTE VSEWQERMRRQKREYLFCFVGATRNYGGSIRGSIIGQCKDSSSCKLLDCGDKTTNCYNPVNVMKAFESSVFCLQPPGDTPTRRSTFDSILAGCIPVFFHP GSAYTQYKWHLPKNHTKYSVFIPEKKLRDRRFRINETLL |
Full Sequence |
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Protein Sequence Length: 445 Download |
MGKPSRSTIL GFVFIFYTMI CLLLLRNCYS SIIGSTKIDG IKVNSKQVNA CLGRYIYIHD 60 LPKQFNEDVL ENCQLITRKI DKYDTCMYTL NSGFGPRIEN SNGILSNSTS WFITDHFFLE 120 VIFHNRMKNY ECLTNDSSLA SAIYVPFYAG LDLRRHLWGF KPSVRDSSGK NLIKWLLEKP 180 EWEKMRGLDH FLVSGRPSLD FRRQSNSKWG SMFRILPESQ NMTMLSVDSQ SWSNDLAIPY 240 PTYFHPSKQT EVSEWQERMR RQKREYLFCF VGATRNYGGS IRGSIIGQCK DSSSCKLLDC 300 GDKTTNCYNP VNVMKAFESS VFCLQPPGDT PTRRSTFDSI LAGCIPVFFH PGSAYTQYKW 360 HLPKNHTKYS VFIPEKKLRD RRFRINETLL GVSKVEEEAM REEVIRLIPR TVYGDHKSKL 420 EDAFDLAVKG VLERVEKLRG AINL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-64 | 50 | 378 | 344 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_193135.2 | 0 | 49 | 439 | 93 | 488 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002300146.1 | 0 | 39 | 442 | 95 | 492 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518606.1 | 0 | 49 | 442 | 74 | 467 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002518609.1 | 0 | 49 | 442 | 74 | 470 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 49 | 438 | 100 | 497 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |