Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10006440m |
Family | GT47 |
Protein Properties | Length: 530 Molecular Weight: 59992.5 Isoelectric Point: 7.2527 |
Chromosome | Chromosome/Scaffold: 9 Start: 17162448 End: 17165582 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 106 | 450 | 0 |
CLGRYIYIHQLPGRFNQDLLQNCHLLTPGTDKNMCPYLGNFGFGPGINEENQEIVLLNESWFLTNQFLLEVIFHNKMKNYRCLTNDSSIASAIYVPFYAG LDIGRYLFGGVSTLLRDSSGLDLVKWLAEKPEWKKLWGRDHFLVAGRIAWDFRRQTDNESDWGSKFRFLPESKNMSMLSIESSSWNNDFAIPYPTCFHPS KESEIIGWQDRMRKRKRQYLFSFAGAPRPDLKGSIRGKIIDQCLASGSLCRLIDCNYGATNCDNPVNVMKMFQNSVFCLQPPGDSYTRKSVFDTILAGCI PVFFHPGTAYAQYLWHLPKNYSSYSLYIPVRDVKDWRVNVNETLV |
Full Sequence |
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Protein Sequence Length: 530 Download |
MTIYDHKLME KPKPKAMAGI NCWSQQLGFA ILISFVLCFV LLCFDYSALT STTATTSHSG 60 HSTPLVNNFA NANAHAIITN SSDDSISPLP HNPLVIVLNQ TEIDSCLGRY IYIHQLPGRF 120 NQDLLQNCHL LTPGTDKNMC PYLGNFGFGP GINEENQEIV LLNESWFLTN QFLLEVIFHN 180 KMKNYRCLTN DSSIASAIYV PFYAGLDIGR YLFGGVSTLL RDSSGLDLVK WLAEKPEWKK 240 LWGRDHFLVA GRIAWDFRRQ TDNESDWGSK FRFLPESKNM SMLSIESSSW NNDFAIPYPT 300 CFHPSKESEI IGWQDRMRKR KRQYLFSFAG APRPDLKGSI RGKIIDQCLA SGSLCRLIDC 360 NYGATNCDNP VNVMKMFQNS VFCLQPPGDS YTRKSVFDTI LAGCIPVFFH PGTAYAQYLW 420 HLPKNYSSYS LYIPVRDVKD WRVNVNETLV GISEDRILAL REQVVRLIPS VIYADPRSKL 480 ETLEDAFDLA VKGILERIEQ VRSSIRQGRD PGVGFADGDD YKYTFAPYA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 7.0e-66 | 105 | 452 | 362 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB10178.1 | 0 | 29 | 528 | 25 | 475 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_193135.2 | 0 | 29 | 528 | 33 | 514 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002300146.1 | 0 | 7 | 529 | 5 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518609.1 | 0 | 25 | 517 | 9 | 482 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 9 | 528 | 1 | 524 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |