Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi5g18927.1 |
Family | GT47 |
Protein Properties | Length: 562 Molecular Weight: 62681.5 Isoelectric Point: 10.866 |
Chromosome | Chromosome/Scaffold: 5 Start: 22026464 End: 22028450 |
Description | glycosyltransferase 18 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 81 | 429 | 0 |
CKAGLIYVYDLPPEFNHDLVTHCGRLWPWYSFCPYLTNGGFGRPSTESPAFSSLVPNASLPNWYNTDQFPLEVIIHRRLLSHPCRTTDPSLAAAFYVPFY AGLDVGSHLWGLNSTVADRDRAGTRLLGWLRNQTAFKSSGGWDHFITLGRITWDFRRYDVHGWGTNFVLMPGMENVTRLVIEGDRQDAMDVGVPYPTGFH PRGARDVRAWQRHVLSRNRTRLFGFAGAERSGFRDDFRKVLVGECEDAGHAHCRSVNCRGTRCNNDTAEVTGLFLESKFCLQPRGDSYTRRSLFDCMVAG AVPVLFWRRTAYDQYRWFLPAGAGGKGGKEREWSVFMDRRALQAGNVTV |
Full Sequence |
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Protein Sequence Length: 562 Download |
MPESPTSPAA KPLSPPGSPL NAPTPSAASA LLRATVLFLA FLALQLVLFK SLLRFPSTRF 60 LPAPGRCSST WANGAADVGA CKAGLIYVYD LPPEFNHDLV THCGRLWPWY SFCPYLTNGG 120 FGRPSTESPA FSSLVPNASL PNWYNTDQFP LEVIIHRRLL SHPCRTTDPS LAAAFYVPFY 180 AGLDVGSHLW GLNSTVADRD RAGTRLLGWL RNQTAFKSSG GWDHFITLGR ITWDFRRYDV 240 HGWGTNFVLM PGMENVTRLV IEGDRQDAMD VGVPYPTGFH PRGARDVRAW QRHVLSRNRT 300 RLFGFAGAER SGFRDDFRKV LVGECEDAGH AHCRSVNCRG TRCNNDTAEV TGLFLESKFC 360 LQPRGDSYTR RSLFDCMVAG AVPVLFWRRT AYDQYRWFLP AGAGGKGGKE REWSVFMDRR 420 ALQAGNVTVL EVLQGFSEQR VRRMRERVVE MIPRLVYASS GGLGDGMADA FDVALSGVLK 480 RFRRRRWSVA REGRPPGPVV DRRVNGTSMA PPVSNGKNWS AIRRRRRRRF SRDKSRRVSS 540 SHIKPVVPQG EASGRQSLQI S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-47 | 80 | 436 | 368 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY95237.1 | 0 | 81 | 487 | 64 | 468 | hypothetical protein OsI_17054 [Oryza sativa Indica Group] |
GenBank | EAZ00823.1 | 0 | 17 | 492 | 15 | 487 | hypothetical protein OsI_22853 [Oryza sativa Indica Group] |
GenBank | EAZ36900.1 | 0 | 17 | 492 | 15 | 487 | hypothetical protein OsJ_21244 [Oryza sativa Japonica Group] |
RefSeq | NP_001057569.1 | 0 | 17 | 561 | 15 | 556 | Os06g0342000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448367.1 | 0 | 1 | 561 | 1 | 568 | hypothetical protein SORBIDRAFT_06g026010 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE161828 | 263 | 129 | 391 | 0 |
EE180597 | 243 | 149 | 391 | 0 |
EE161829 | 240 | 152 | 391 | 0 |
EE180596 | 232 | 129 | 360 | 0 |
DY290373 | 361 | 115 | 474 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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