Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G152000.1 |
Family | GT47 |
Protein Properties | Length: 528 Molecular Weight: 61016.5 Isoelectric Point: 6.4366 |
Chromosome | Chromosome/Scaffold: 11 Start: 25837677 End: 25840179 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 94 | 435 | 0 |
CVGRYIFVHDLPSRFNEDLVNNCRLLTRGTDKNMCPYLDNLGFGPEIENPEDVLINNSWFLTNQFLLEVIFHNKMKRYECLTNDSSIASAIYVPFYAGLD MSLYLWGFNTTVRDSASLGLVKWLSEKPEWKRMWGRDHFLVAGRIAWDFRRQSDNETDWGSKLRFLPESKNMSMLSIESSSWNNDYAIPYPTCFHPSKDS EIFRWQDRMRRQNRQYLFSFAGAPRPEYQNSIRGKIIDQCLASKSQCKLLDCNYGTTNCDNPVNVMKVFQSSIFCLQPPGDSYTRRSIFDSILAGCIPVF FHPGTAYAQYIWHLPKNYTAYSVYLPVKDLSEWKINLNETLL |
Full Sequence |
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Protein Sequence Length: 528 Download |
MENPITSKCC NHQPWFVLLV FFVFCIELFS FDYSGFTAKK SALVTVLDDN HGTVINTQSS 60 LPHDFTEITN ASVYPLPKTD EKGDLKVGTE IDSCVGRYIF VHDLPSRFNE DLVNNCRLLT 120 RGTDKNMCPY LDNLGFGPEI ENPEDVLINN SWFLTNQFLL EVIFHNKMKR YECLTNDSSI 180 ASAIYVPFYA GLDMSLYLWG FNTTVRDSAS LGLVKWLSEK PEWKRMWGRD HFLVAGRIAW 240 DFRRQSDNET DWGSKLRFLP ESKNMSMLSI ESSSWNNDYA IPYPTCFHPS KDSEIFRWQD 300 RMRRQNRQYL FSFAGAPRPE YQNSIRGKII DQCLASKSQC KLLDCNYGTT NCDNPVNVMK 360 VFQSSIFCLQ PPGDSYTRRS IFDSILAGCI PVFFHPGTAY AQYIWHLPKN YTAYSVYLPV 420 KDLSEWKINL NETLLRMPED RILRLREEVI KLIPRVVYAS SRSRSETLED AFDLAVKGIL 480 DRIESVRVMI REGKDPSIGF ADGDDYKYTF STYDTSMLNH FKIFHMV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-69 | 93 | 425 | 348 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB10178.1 | 0 | 15 | 514 | 24 | 476 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_193135.2 | 0 | 15 | 514 | 32 | 515 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002300146.1 | 0 | 1 | 513 | 7 | 515 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321098.1 | 0 | 92 | 511 | 48 | 466 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532518.1 | 0 | 1 | 513 | 1 | 524 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |