Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma20g00760.1 |
Family | GT47 |
Protein Properties | Length: 466 Molecular Weight: 53446.5 Isoelectric Point: 9.1697 |
Chromosome | Chromosome/Scaffold: 20 Start: 478653 End: 481614 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 76 | 409 | 0 |
KPLFYIYNLPSRFNLGLLERCQSLNIYTNMCPHVANNGLGQPLSTPDWYSTHQFIAEMIVHARLENHPCRTWDPYTAVLFYVPFYGGLYASSVFREANLT LRDSLAVDLVDFLQSQPWWKRHYGKDHFVALGRTAWDFMRTEGGSDFGANIFLNLPPVLNMSVLTVERQPWRGHNQFAIPYPSYFHPKTLAQTLTWQSHL RRRARPHLFSFVGGTRPGLQKAKVRDHIVSQCQASKRCVLVRCASGDSKCHNPMNVLEVMEKSTFCLQAPGDSFTRRSTFDSVLAGCIPVFFSEHTAYTQ YKWYFPRERDTYSVFIDEREVIEGKEKMMIEEVL |
Full Sequence |
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Protein Sequence Length: 466 Download |
MFFRKPSPTP PLHSLSSLPS TAISFSKTKD PHNNKLRYTI FSCLFLASWL LILHRFNFTI 60 LAPSTTTTTP TCDGSKPLFY IYNLPSRFNL GLLERCQSLN IYTNMCPHVA NNGLGQPLST 120 PDWYSTHQFI AEMIVHARLE NHPCRTWDPY TAVLFYVPFY GGLYASSVFR EANLTLRDSL 180 AVDLVDFLQS QPWWKRHYGK DHFVALGRTA WDFMRTEGGS DFGANIFLNL PPVLNMSVLT 240 VERQPWRGHN QFAIPYPSYF HPKTLAQTLT WQSHLRRRAR PHLFSFVGGT RPGLQKAKVR 300 DHIVSQCQAS KRCVLVRCAS GDSKCHNPMN VLEVMEKSTF CLQAPGDSFT RRSTFDSVLA 360 GCIPVFFSEH TAYTQYKWYF PRERDTYSVF IDEREVIEGK EKMMIEEVLL GFGEKEVERM 420 REVLIGLIPT LTYAHPNATA AFPDVVDVML RRLSRRVTHH FNPII* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-67 | 80 | 402 | 337 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC42883.1 | 0 | 56 | 457 | 51 | 447 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_177014.1 | 0 | 56 | 457 | 51 | 447 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270383.1 | 0 | 78 | 457 | 124 | 499 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300452.1 | 0 | 72 | 453 | 1 | 391 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336132.1 | 0 | 64 | 453 | 14 | 412 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265125 | 332 | 80 | 400 | 0 |
FC899396 | 311 | 80 | 381 | 0 |
GR839741 | 261 | 1 | 261 | 0 |
DY298787 | 321 | 107 | 418 | 0 |
FC884199 | 295 | 107 | 392 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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