Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10022862 |
Family | GT47 |
Protein Properties | Length: 610 Molecular Weight: 69600.7 Isoelectric Point: 6.1113 |
Chromosome | Chromosome/Scaffold: 8 Start: 526287 End: 528116 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 141 | 482 | 0 |
CGGRDVYVHDLPSRFNDDMLKECRSLSLWTNMCKFTTNAGMGPPLENVEGVFSNTGWYATNQFAVDVIFNNRMKQYDCLTNDSSLAAAIFVPFYAGFDIA RYLWGHPISRRDAASLDLVEWLMKRPEWEIMQGRDHFLVAGRITWDFRRLSEEEGDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDAD VFAWQERMRNLERKYLFSFAGAPRPGNSKSIRGQIIDQCRSSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFH PGSAYTQYTWHLPKNYTTYSVFIPEDDIRKRNLSIEERLSQI |
Full Sequence |
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Protein Sequence Length: 610 Download |
MGDLKFLTRR TTRPATTDDV LEQMEKGNGK NQQNRVCLLA SLSAFFWILL LYFHFVVLSG 60 RTFSDQSLTL KSNPPAVADF RTSFPNPLPK KEVEESESES PPIPKYEEKS LPIPEVTDEE 120 PPKSFTFTRA LSTVENKTDK CGGRDVYVHD LPSRFNDDML KECRSLSLWT NMCKFTTNAG 180 MGPPLENVEG VFSNTGWYAT NQFAVDVIFN NRMKQYDCLT NDSSLAAAIF VPFYAGFDIA 240 RYLWGHPISR RDAASLDLVE WLMKRPEWEI MQGRDHFLVA GRITWDFRRL SEEEGDWGNK 300 LLFLPAAKNM SMLVVESSPW NANDFGIPYP TYFHPAKDAD VFAWQERMRN LERKYLFSFA 360 GAPRPGNSKS IRGQIIDQCR SSKVGKLLEC DFGESKCHSP SSIMQMFQSS LFCLQPQGDS 420 YTRRSAFDSM LAGCIPVFFH PGSAYTQYTW HLPKNYTTYS VFIPEDDIRK RNLSIEERLS 480 QIPPEQVRIM RENVIKLIPQ LIYADPRSKL ETFKDAFDVA VQAVIDKVTR LRKNMIEGRT 540 EYNNFVEENS WKYALLEEGQ REVGGHEWDP FFSKPKPNDG GGGTGGESST GSEAEAAKNS 600 WKNEQRDQK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 9.0e-69 | 140 | 482 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD21751.1 | 0 | 24 | 608 | 1 | 598 | unknown protein [Arabidopsis thaliana] |
GenBank | ACY08857.1 | 0 | 22 | 608 | 12 | 616 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
DDBJ | BAE98519.1 | 0 | 22 | 608 | 18 | 617 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_179627.2 | 0 | 22 | 608 | 18 | 617 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002301846.1 | 0 | 24 | 608 | 1 | 584 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |