Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.B02354.1 |
Family | GT47 |
Protein Properties | Length: 502 Molecular Weight: 58516 Isoelectric Point: 9.4857 |
Chromosome | Chromosome/Scaffold: 2 Start: 44546878 End: 44548383 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 102 | 441 | 0 |
SCKGRHVYIQKLPRQFNEDMLRHCESLNNWTNMCDSLSNFGLGPQLPKSNKVLGNTGWYATDQFSLEVIFHNRMRRYKCLTDDSSVASAIFVPYYAGLDV ARYLWDSNRTLRDVGPSDLVRWLRRRQEWKVMGGRDHFLVAGRIVWDFRRENDRPPNWGNNLVLLPESMNMTILVLESSLIDRGNDFAIPYPTYFHPSKD VEVRQWQSRMRRQKRRYLFSFAGAPRKDLYNSIRDKIISQCRASRRKCKLLECDSRGHRCHKPIFLMKLFQSSVFCLQPPGDSYTRRSAFDSMLAGCIPV FFHSGSAYDQYKWHLPGDHSKYSVFIPENHVKYGKVVLER |
Full Sequence |
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Protein Sequence Length: 502 Download |
MEKALLARCR NRWWLVILAG FLLWFALILS FHANPIHFVN YSSIDLAENY SQSNNVWSDH 60 AKNKGETGRP FEGMKETNSS VPSSEIAEEK VIRQYREADS ISCKGRHVYI QKLPRQFNED 120 MLRHCESLNN WTNMCDSLSN FGLGPQLPKS NKVLGNTGWY ATDQFSLEVI FHNRMRRYKC 180 LTDDSSVASA IFVPYYAGLD VARYLWDSNR TLRDVGPSDL VRWLRRRQEW KVMGGRDHFL 240 VAGRIVWDFR RENDRPPNWG NNLVLLPESM NMTILVLESS LIDRGNDFAI PYPTYFHPSK 300 DVEVRQWQSR MRRQKRRYLF SFAGAPRKDL YNSIRDKIIS QCRASRRKCK LLECDSRGHR 360 CHKPIFLMKL FQSSVFCLQP PGDSYTRRSA FDSMLAGCIP VFFHSGSAYD QYKWHLPGDH 420 SKYSVFIPEN HVKYGKVVLE RRLLQIPKKD VLAMREEVIR LIPAILYADP TSELENYEDA 480 FDLSVKGVLE RVQRIREETL G* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-65 | 102 | 432 | 346 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 97 | 496 | 151 | 548 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
EMBL | CAN64889.1 | 0 | 72 | 498 | 266 | 693 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280815.1 | 0 | 72 | 498 | 59 | 486 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313430.1 | 0 | 88 | 496 | 123 | 532 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002532518.1 | 0 | 1 | 499 | 1 | 501 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |