Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os10g32080.1 |
Family | GT47 |
Protein Properties | Length: 507 Molecular Weight: 56612.4 Isoelectric Point: 9.09 |
Chromosome | Chromosome/Scaffold: 10 Start: 16851912 End: 16853554 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 78 | 416 | 0 |
CAGRRVYMYELPPRFNAELVRDCRLYSRSMDVCKLVVNDGFGPALPGGGALPERDVYDTDQYMLALIYHARMRRYECLTGDAAAADAVFVPFYAGFDAAM NLMKSDLAARDALPRQLAEWLVRRPEWRAMGGRDHFMVAARPVWDFYRGGDDGWGNALLTYPAIRNTTVLTVEANPWRGIDFGVPFPSHFHPTSDADVLR WQDRMRRRGRRWLWAFAGAPRPGSTKTVRAQIIEQCTASPSCTHFGSSPGHYNSPGRIMELLESAAFCVQPRGDSYTRKSTFDSMLAGCIPVFLHPASAY TQYTWHLPRDYRSYSVFVPHTDVVAGGRNASIEAALRRI |
Full Sequence |
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Protein Sequence Length: 507 Download |
MAASVVSDKS SGGASLLRPS RVLFLAVLST AFWSVIFYAH HSAVQGNATM ASVLLRPSSF 60 SRPLLTSFRL IGGGLDRCAG RRVYMYELPP RFNAELVRDC RLYSRSMDVC KLVVNDGFGP 120 ALPGGGALPE RDVYDTDQYM LALIYHARMR RYECLTGDAA AADAVFVPFY AGFDAAMNLM 180 KSDLAARDAL PRQLAEWLVR RPEWRAMGGR DHFMVAARPV WDFYRGGDDG WGNALLTYPA 240 IRNTTVLTVE ANPWRGIDFG VPFPSHFHPT SDADVLRWQD RMRRRGRRWL WAFAGAPRPG 300 STKTVRAQII EQCTASPSCT HFGSSPGHYN SPGRIMELLE SAAFCVQPRG DSYTRKSTFD 360 SMLAGCIPVF LHPASAYTQY TWHLPRDYRS YSVFVPHTDV VAGGRNASIE AALRRIPAAT 420 VARMREEVIR LIPRITYRDP AATLVTFRDA FDVAVDAVLD RVARRRRAAA EGREYVDVFD 480 GHDSWKHNLL DDGQTQIGPH EFDPYL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-62 | 77 | 416 | 355 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005794 | Golgi apparatus |
GO:0005975 | carbohydrate metabolic process |
GO:0007165 | signal transduction |
GO:0008152 | metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 63 | 506 | 142 | 588 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
GenBank | EAZ16326.1 | 0 | 1 | 506 | 1 | 472 | hypothetical protein OsJ_31788 [Oryza sativa Japonica Group] |
GenBank | EEC67105.1 | 0 | 1 | 506 | 120 | 625 | hypothetical protein OsI_33901 [Oryza sativa Indica Group] |
RefSeq | NP_001064768.1 | 0 | 1 | 506 | 1 | 506 | Os10g0458900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002301846.1 | 0 | 63 | 506 | 109 | 555 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |