Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma17g11850.3 |
Family | GT47 |
Protein Properties | Length: 341 Molecular Weight: 39551.9 Isoelectric Point: 10.0037 |
Chromosome | Chromosome/Scaffold: 17 Start: 8899154 End: 8900998 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 3 | 289 | 0 |
KRLKVWAYKEGEQPLVHDGPVNNKYSIEGQFIDEMDMASMSPFKATHPEQAHLFLLPYSVSKVIRYVYKPRRSRSDYDPDRLQRLVADYINILANRYPYW NRSKGADHFLVSCHDWGPRISDANPELFKYFIRALCNANTSEGFQPNRDVSIPEVYLPSGKLGPPNMGQHPNNRTILAFFAGGAHGKIRKKLLKRWKNKD KEVQVHEYLPKGQDYTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPFIDVLNWRKFSMEIAVERMPEIKTILQSV |
Full Sequence |
---|
Protein Sequence Length: 341 Download |
MMKRLKVWAY KEGEQPLVHD GPVNNKYSIE GQFIDEMDMA SMSPFKATHP EQAHLFLLPY 60 SVSKVIRYVY KPRRSRSDYD PDRLQRLVAD YINILANRYP YWNRSKGADH FLVSCHDWGP 120 RISDANPELF KYFIRALCNA NTSEGFQPNR DVSIPEVYLP SGKLGPPNMG QHPNNRTILA 180 FFAGGAHGKI RKKLLKRWKN KDKEVQVHEY LPKGQDYTKL MGLSKFCLCP SGHEVASPRV 240 VEAIYAGCVP VIICDNYSLP FIDVLNWRKF SMEIAVERMP EIKTILQSVS KDKYLELYSN 300 VRRVRRHFVI NRPAKPFDLI HMILHSLWLR RLNFKLTASH * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-57 | 1 | 289 | 309 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP03872.1 | 0 | 1 | 336 | 130 | 465 | Exostosin-like [Medicago truncatula] |
GenBank | ABP03873.1 | 0 | 1 | 339 | 278 | 616 | Exostosin-like [Medicago truncatula] |
EMBL | CBI25537.1 | 0 | 1 | 336 | 139 | 475 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263848.1 | 0 | 1 | 336 | 58 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324623.1 | 0 | 1 | 337 | 1 | 336 | predicted protein [Populus trichocarpa] |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CO983212 | 237 | 106 | 341 | 0 |
CO980396 | 211 | 129 | 339 | 0 |
FG997014 | 180 | 162 | 341 | 0 |
BE821177 | 192 | 150 | 341 | 0 |
EC939466 | 238 | 1 | 237 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|