Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma17g11860.2 |
Family | GT47 |
Protein Properties | Length: 497 Molecular Weight: 57204.9 Isoelectric Point: 9.3939 |
Chromosome | Chromosome/Scaffold: 17 Start: 8902961 End: 8905996 |
Description | xylogalacturonan deficient 1 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 159 | 446 | 0 |
KRFKVWVYQEGEQPLVHDGPVNNIYAIEGQFMDEIDNNDKWSQFRARHPEEAHVFFLPFSIANVVHYVYKPILKQSDYEPVRLQLLVEDYISVIEDKYPY WNRSKGADHFLLSCHDWAPKVSNGNPELFQSFIRALCNANTSEGFHPNRDVSIPEVYLPVGKLGPPSLGQHPNSRTILAFFAGGVHGEIRKILLKHWKDK DNEVRVHEYLPKSQNYTKLMGQSKFCLCPSGHEVASPRVVEAIHAGCVPVIICDNYSLPFSDVLHWSQFSVKVSVQKIPEIKSILQSI |
Full Sequence |
---|
Protein Sequence Length: 497 Download |
MGMGCSRCSI SALLFPLFFF VLSFIFFFPW KKQNHLTHHF AFAPPLVLST IKNSDNHTNI 60 RTSLSPSPQP PPPPFELLSN INPANDNYMY NGTVQSSVIQ KDLTSLEKIE EGLAQARASI 120 QEYILSRNYT SQRRESFVPK GSIYRNPHAF LQSHIEMVKR FKVWVYQEGE QPLVHDGPVN 180 NIYAIEGQFM DEIDNNDKWS QFRARHPEEA HVFFLPFSIA NVVHYVYKPI LKQSDYEPVR 240 LQLLVEDYIS VIEDKYPYWN RSKGADHFLL SCHDWAPKVS NGNPELFQSF IRALCNANTS 300 EGFHPNRDVS IPEVYLPVGK LGPPSLGQHP NSRTILAFFA GGVHGEIRKI LLKHWKDKDN 360 EVRVHEYLPK SQNYTKLMGQ SKFCLCPSGH EVASPRVVEA IHAGCVPVII CDNYSLPFSD 420 VLHWSQFSVK VSVQKIPEIK SILQSISRKK YLRLHMNVLR VRRHFMINRP AKPFDMMHMI 480 LHSIWLRRLN IKLIAS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-62 | 157 | 446 | 308 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP03872.1 | 0 | 100 | 493 | 73 | 465 | Exostosin-like [Medicago truncatula] |
GenBank | ABP03873.1 | 0 | 95 | 496 | 226 | 616 | Exostosin-like [Medicago truncatula] |
EMBL | CBI21065.1 | 0 | 106 | 493 | 15 | 400 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25537.1 | 0 | 104 | 493 | 86 | 475 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263848.1 | 0 | 104 | 493 | 5 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |