Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma17g27550.1 |
Family | GT47 |
Protein Properties | Length: 646 Molecular Weight: 73158.1 Isoelectric Point: 8.1324 |
Chromosome | Chromosome/Scaffold: 17 Start: 29380824 End: 29385426 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 315 | 596 | 0 |
QTLKVYVYREGARPIMHSPFFTGLYASEGWFMKQMEANKRFLTRDPNKAHLFYLPFSSRMLEETLYVQNSHNHKNLVQYLHNYVEMIAGKYTFWNRTGGA DHFLVGCHDWAPGETKVDMANCIRSLCNADVKEGFVFGKDASLPETYVRDAKIPTKDLSGNSASKRTTLAFFAGSMHGYVRPILLQHWENKDPDMKIFGR LPKSKGNRNYIQYMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFLEVLNWESFAVIVLEKDIPNLKNILLSI |
Full Sequence |
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Protein Sequence Length: 646 Download |
MGLEFLSLFQ LETKRLLWLI GITFAVILTF QYLEFPYGTV LLSLFSAEKI PTPGSSTFKA 60 SDAPSISELV NNVTLFNPAN STGDHAFEIA NKTKSGENDT IPRIGLVLEP GSTPNNSLGL 120 DGSDQSSKTK SINRSENVAE TPQGGDPGPI SFNNTIDLSF SANQFQEDNI SSTEQKSGSQ 180 YASSTNVSTN IVTAVLSNDS SISLFQKDNT TNSIKEESIR SSQNDAKVSV PNEKKDSHTP 240 IPEVTTVSEM NKLLLQSHNS YRSMRPSWFS AVDQELLQAR SEIENAPIVK KDPNFYAHIY 300 HNVSMFKRSY ELMEQTLKVY VYREGARPIM HSPFFTGLYA SEGWFMKQME ANKRFLTRDP 360 NKAHLFYLPF SSRMLEETLY VQNSHNHKNL VQYLHNYVEM IAGKYTFWNR TGGADHFLVG 420 CHDWAPGETK VDMANCIRSL CNADVKEGFV FGKDASLPET YVRDAKIPTK DLSGNSASKR 480 TTLAFFAGSM HGYVRPILLQ HWENKDPDMK IFGRLPKSKG NRNYIQYMKS SKYCICAKGY 540 EVNSPRVVEA IFYECVPVII SDNFVPPFLE VLNWESFAVI VLEKDIPNLK NILLSIPEKQ 600 YLRLQMRVKK VQQHFLWHKN PVKYDIFHMI LHSVWYNRVF SAPAR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-69 | 317 | 596 | 300 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20855.1 | 0 | 1 | 645 | 1 | 604 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197954.1 | 0 | 8 | 640 | 8 | 650 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002281263.1 | 0 | 1 | 645 | 1 | 669 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309547.1 | 0 | 193 | 645 | 18 | 471 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324801.1 | 0 | 250 | 645 | 1 | 398 | predicted protein [Populus trichocarpa] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |