Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G108000.1 |
Family | GT47 |
Protein Properties | Length: 471 Molecular Weight: 54218.5 Isoelectric Point: 10.0226 |
Chromosome | Chromosome/Scaffold: 04 Start: 22071842 End: 22073766 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 136 | 421 | 0 |
KRLKVWTYREGEPPLVHNGPLNNIYAIEGQFMDEMESKENPFKARHPDQAHIFFLPLSVTGVVHYVYKPITTVRDYSRDRLQRLVTDYINTVAAKYPYWN RSRGADHFMVSCHDWAPEVSHANPQLFKHFIRVLCNANTSEGFRPKIDVSLPEIYLPFGKLGPPDLSRGPNNRPVLAFFAGSPHGYIRKILLEYWKDKDS EVQVHAQLPKDVNYTKMMGQSKFCLCPSGFEVASPREVEAIYAGCVPVIISDNYTLPFSDVLNWSQFSVQVPVGKIPEIKTILQGI |
Full Sequence |
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Protein Sequence Length: 471 Download |
MVGTSSFHFF PVFLLLLLLL LLSFSHFNSN QFTQVFTSFS PFRREETNHT TTTPHVSLDG 60 VLSTSMYKST KHKAATIKKK SNPERIEQDL AKARAAILKA VQQQNFTLEK QDTFVPRGSI 120 YRNAYAFYQS HAEMVKRLKV WTYREGEPPL VHNGPLNNIY AIEGQFMDEM ESKENPFKAR 180 HPDQAHIFFL PLSVTGVVHY VYKPITTVRD YSRDRLQRLV TDYINTVAAK YPYWNRSRGA 240 DHFMVSCHDW APEVSHANPQ LFKHFIRVLC NANTSEGFRP KIDVSLPEIY LPFGKLGPPD 300 LSRGPNNRPV LAFFAGSPHG YIRKILLEYW KDKDSEVQVH AQLPKDVNYT KMMGQSKFCL 360 CPSGFEVASP REVEAIYAGC VPVIISDNYT LPFSDVLNWS QFSVQVPVGK IPEIKTILQG 420 IPDSKYLKMH KRVKRVRRHF ELNRPAKPFD VIHMVLHSVW LRRLNFRLSP * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-66 | 134 | 421 | 306 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP03872.1 | 0 | 78 | 468 | 74 | 465 | Exostosin-like [Medicago truncatula] |
GenBank | ABP03873.1 | 0 | 64 | 468 | 216 | 613 | Exostosin-like [Medicago truncatula] |
EMBL | CBI21065.1 | 0 | 77 | 468 | 9 | 400 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25537.1 | 0 | 28 | 468 | 29 | 475 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263848.1 | 0 | 77 | 468 | 1 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |