Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma20g15980.2 |
Family | GT47 |
Protein Properties | Length: 494 Molecular Weight: 57241.4 Isoelectric Point: 8.6704 |
Chromosome | Chromosome/Scaffold: 20 Start: 21973585 End: 21976821 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 164 | 445 | 0 |
EKVFKIFVYEEGEPPLFHYGPCKNIYSMEGIFINSLEINSQFRTQNPDEAHVYFLPFSVVMILEHLFHPVIRDKAVLERTIGDYVHIISHKYKYWNRSYG ADHFMLSCHDWGPRATWYVKELYFIAIRVLCNANISEHFNPKKDASFPEINLVNGETRGLIGGYPPCNRTILAFFAGQMHGRIRPVLFQHWEGKDKDVLV YEKLPDGVPYHETMKKSKYCICPSGFEVASPRIVEAIYAQCVPVIISQQYVLPFSDVLNWDSFSVQILVSDVPKLKEILLGI |
Full Sequence |
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Protein Sequence Length: 494 Download |
MFVLSFQRMR HFNRTHSSLA VFGITAFVVF FGLDPLEGVK LVSRFFVSTP TCALIHQRVQ 60 KGHPELYKES CFVNKIGECR AQKPMACRGE SNFVNKMLIE KQIEDDRKLE KVEASLAKAR 120 ALIKEALLLR TNATVLQDDT SDYIPEGDIY RNAVAFHRSY QLMEKVFKIF VYEEGEPPLF 180 HYGPCKNIYS MEGIFINSLE INSQFRTQNP DEAHVYFLPF SVVMILEHLF HPVIRDKAVL 240 ERTIGDYVHI ISHKYKYWNR SYGADHFMLS CHDWGPRATW YVKELYFIAI RVLCNANISE 300 HFNPKKDASF PEINLVNGET RGLIGGYPPC NRTILAFFAG QMHGRIRPVL FQHWEGKDKD 360 VLVYEKLPDG VPYHETMKKS KYCICPSGFE VASPRIVEAI YAQCVPVIIS QQYVLPFSDV 420 LNWDSFSVQI LVSDVPKLKE ILLGISEDKY MRLQEGVKQV QRHFVVNNPP KRYDVFHMII 480 HSIWLRRLNV RVK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-64 | 163 | 445 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28482.1 | 0 | 91 | 492 | 234 | 634 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_187419.1 | 0 | 111 | 492 | 87 | 469 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002264111.1 | 0 | 163 | 492 | 1 | 330 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320537.1 | 0 | 106 | 491 | 8 | 392 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524592.1 | 0 | 108 | 492 | 3 | 386 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |