Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G219000.1 |
Family | GT47 |
Protein Properties | Length: 844 Molecular Weight: 94948.8 Isoelectric Point: 5.793 |
Chromosome | Chromosome/Scaffold: 13 Start: 53881361 End: 53885372 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 513 | 794 | 0 |
NTLKVYVYKEGKRPIVHTPVLRGIYASEGWFMKQLESNKKFVTKNPRDAHLFYLPFSSRMLEETLYVPDSHSHKNLIEYLKNYVDTIAAKYPFWNRTEGA DHFLVACHDWAPSETRNHMANCIRALCNSDVREGYVFGKDVSLPETYVRNPQKPLRDLGGNPPSKRPILAFFAGSMHGYLRPILLEQWGNKDPDMKIFGK MPNVKGKMNYIRHMKSSKYCLCPRGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLNWESFSVFILEKDIPNLKKILLSI |
Full Sequence |
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Protein Sequence Length: 844 Download |
MGHELKSLSQ LDTRKLIWLI GITFAVIVTF QYIELPYGNV LWSLFPSGKV SVDEKSSFLA 60 SGPSSAESGF YFNGTNAGNE TVHDDEIFEG KDIDTDVITE ADVGLNKSST FGEGTKAWKE 120 SSTAEPVELN KNSTADKAGN ETAHDDEIFE GRDLDADVIT EADVGLNKSS TFDEGTKAWK 180 ESSTAEPVEL NKNSTVDNAG NETAHDDEIF EGRDIDTDII TEADVGLNKS STFNEGTKAP 240 KESSTAELVL ELNKNSTVNN AESSKSEEFE KDSNITSLNN LNQTGAVNET AKADDFTPEV 300 GLNRSSILDK ELDERSNITM LNIAESSNNK SVAENVGTSE ESFASKNDTV DINTSNNNAP 360 DTGLGTTNST SEKGVKTNIS APVVSFNSSI SSVEQHVTPS FDKNEKPKPK PIQNDFTKPS 420 DNSSPRKAPK LKKKPEMLPP AVTTIADMNN LLYQSRVSYE SPTPKWSSRA DKVLLEARLQ 480 IENAPIIKND PQLYAPLFRN LSMFKRSYEL MENTLKVYVY KEGKRPIVHT PVLRGIYASE 540 GWFMKQLESN KKFVTKNPRD AHLFYLPFSS RMLEETLYVP DSHSHKNLIE YLKNYVDTIA 600 AKYPFWNRTE GADHFLVACH DWAPSETRNH MANCIRALCN SDVREGYVFG KDVSLPETYV 660 RNPQKPLRDL GGNPPSKRPI LAFFAGSMHG YLRPILLEQW GNKDPDMKIF GKMPNVKGKM 720 NYIRHMKSSK YCLCPRGYEV NSPRVVEAIF YECVPVIISD NFVPPFFEVL NWESFSVFIL 780 EKDIPNLKKI LLSIPIKRYR QMQLRVKKIQ QHFLWHPKPE KYDIFHMILH SVWYNRVFQM 840 KPR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-76 | 515 | 794 | 300 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_195005.1 | 0 | 420 | 840 | 172 | 593 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002281263.1 | 0.0000000006 | 1 | 98 | 1 | 97 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281263.1 | 0 | 308 | 843 | 116 | 669 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309547.1 | 0 | 381 | 843 | 9 | 471 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324801.1 | 0 | 448 | 843 | 1 | 398 | predicted protein [Populus trichocarpa] |