| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra016609 |
| Family | GT68 |
| Protein Properties | Length: 547 Molecular Weight: 61319.9 Isoelectric Point: 6.6242 |
| Chromosome | Chromosome/Scaffold: 08 Start: 19275510 End: 19277643 |
| Description | O-fucosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT68 | 228 | 522 | 0 |
| DRVLVIPSPKFDYQYDRVIDIDRINTCLGRTVVVSFDQFKKEKGGARIDRFICYFSSPQPCYVDEEHVGKLKGLGVAVGGKLEAPWSEDIKKPSKRGFGE VVEKFKGEDGVIAIGDVFYADLEREWVMQPGGPIKHKCKTLIEPSRLIVLTAQRFIQTFLGKHFVAMHLRRHGFLKFCNAKSPSCFYPIPQAADCISRIV EMANAPVIYLSTDAAESETGLLQSLVVVDGKVVPLVKRPPRNSAEKWDSLLYRHGIEDDSQVDAMLDKTICAMSSVFIGASGSTFTEDILRLRKD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 547 Download |
| MDRNSSDEDE DHRNLIPHHD TRENELHSAT TALATNRANG RGRSPRSAFQ IEEALSRSGN 60 PRKISLNKRY IIAAVSLTLL LFLFLFSFTD TRTFFPLNLS SFKLDANESE LRALYLLKQQ 120 QRDLVSLLNH NNSSNAIESN VESAISLSKQ IEEALLSPHK TGNSSLSGLD SDSITSSCGK 180 VDQSLSERRT IEWKPREDKF LFAICLSGQM SNHLICLEKH MFFAALLDRV LVIPSPKFDY 240 QYDRVIDIDR INTCLGRTVV VSFDQFKKEK GGARIDRFIC YFSSPQPCYV DEEHVGKLKG 300 LGVAVGGKLE APWSEDIKKP SKRGFGEVVE KFKGEDGVIA IGDVFYADLE REWVMQPGGP 360 IKHKCKTLIE PSRLIVLTAQ RFIQTFLGKH FVAMHLRRHG FLKFCNAKSP SCFYPIPQAA 420 DCISRIVEMA NAPVIYLSTD AAESETGLLQ SLVVVDGKVV PLVKRPPRNS AEKWDSLLYR 480 HGIEDDSQVD AMLDKTICAM SSVFIGASGS TFTEDILRLR KDWGTSSMCD EYLCRGEEPN 540 FIAEDE* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd11296 | O-FucT_like | 0.0006 | 200 | 234 | 35 | + GDP-fucose protein O-fucosyltransferase and related proteins. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
| cd11548 | NodZ_like | 0.0001 | 328 | 521 | 195 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
| cd11298 | O-FucT-2 | 7.0e-10 | 387 | 513 | 127 | + GDP-fucose protein O-fucosyltransferase 2. O-FucT-2 adds O-fucose to thrombospondin type 1 repeats (TSRs), and appears conserved in bilateria. The O-fucosylation of TSRs appears to play a role in regulating secretion of metalloproteases of the ADAMTS superfamily. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
| cd11296 | O-FucT_like | 6.0e-16 | 363 | 520 | 168 | + GDP-fucose protein O-fucosyltransferase and related proteins. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD50008.1 | 0 | 1 | 546 | 1 | 594 | AC007651_3 Hypothetical Protein [Arabidopsis thaliana] |
| GenBank | AAM66093.1 | 0 | 1 | 546 | 1 | 566 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_173170.2 | 0 | 1 | 546 | 1 | 564 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_175780.1 | 0 | 7 | 546 | 18 | 563 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_199853.1 | 0 | 1 | 546 | 1 | 566 | unknown protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4ap6_D | 0.006 | 387 | 513 | 277 | 383 | A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose |
| PDB | 4ap6_C | 0.006 | 387 | 513 | 277 | 383 | A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose |
| PDB | 4ap6_B | 0.006 | 387 | 513 | 277 | 383 | A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose |
| PDB | 4ap6_A | 0.006 | 387 | 513 | 277 | 383 | A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose |
| PDB | 4ap5_B | 0.007 | 387 | 513 | 263 | 369 | A Chain A, Crystal Structure Of Human Pofut2 |
