Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 491000 |
Family | GH35 |
Protein Properties | Length: 854 Molecular Weight: 94771.4 Isoelectric Point: 7.5125 |
Chromosome | Chromosome/Scaffold: 7 Start: 1879667 End: 1884572 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 340 | 0 |
LLINGQRRILFSGSIHYPRSTPDMWEGLIQKAKDGGIDVIETYVFWNLHEPTPGKYDFEGRNDLVRFVKTIHKAGLYAHLRIGPYVCAEWNFGGFPVWLK YVPGISFRTDNEPFKRAMKGFTERIVELMKSENLFESQGGPIILSQIENEYGRQGQLLGAEGHNYMTWAAKMAIATETGVPWVMCKEDDAPDPVINTCNG FYCDSFAPNKPYKPLIWTEAWSGWFTEFGGPMHHRPVQDLAFGVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFVTTSYDYDAPIDEYGLIREPKYGHLK ELHR |
Full Sequence |
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Protein Sequence Length: 854 Download |
MGSGDSASRL ILWFCLGLLI LGVGFVQCGV TYDRKALLIN GQRRILFSGS IHYPRSTPDM 60 WEGLIQKAKD GGIDVIETYV FWNLHEPTPG KYDFEGRNDL VRFVKTIHKA GLYAHLRIGP 120 YVCAEWNFGG FPVWLKYVPG ISFRTDNEPF KRAMKGFTER IVELMKSENL FESQGGPIIL 180 SQIENEYGRQ GQLLGAEGHN YMTWAAKMAI ATETGVPWVM CKEDDAPDPV INTCNGFYCD 240 SFAPNKPYKP LIWTEAWSGW FTEFGGPMHH RPVQDLAFGV ARFIQKGGSF VNYYMYHGGT 300 NFGRTAGGPF VTTSYDYDAP IDEYGLIREP KYGHLKELHR AIKMCEKALV SADPVVTSIG 360 NKQQAHVYSA ESGDCSAFLA NYDTESAARV LFNNVHYNLP PWSISILPDC RNAVFNTAKV 420 GVQTSQMEML PTDTKNFQWQ SYLEDLSSLD DSSTFTTQGL LEQINVTRDT SDYLWYMTSV 480 DIGDTESFLH GGELPTLIIQ STGHAVHIFV NGQLSGSAFG TRQNRRFTYQ GKINLHSGTN 540 RIALLSVAVG LPNVGGHFES WNTGILGPVA LHGLSQGKRD LSWQKWTYQV GLKGEAMNLA 600 FPTNTRSIGW MDASLTVQKP QPLTWHKTYF DAPEGNEPLA LDMEGMGKGQ IWVNGESIGR 660 YWTAFATGDC SQCSYTGTYK PNKCQTGCGQ PTQRYYHVPR SWLKPSQNLL VIFEELGGNP 720 SSVSLVKRSV SGVCAEVSEY HPNIKNWQIE SYGKGQTFHR PKVHLKCSPG QAIASIKFAS 780 FGTPLGTCGS YQQGECHAAT SYAILERKCV GKARCAVTIS NTNFGKDPCP NVLKRLTVEA 840 VCAPETSVTT WRP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-6 | 52 | 188 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 7.0e-22 | 30 | 332 | 362 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 3.0e-23 | 765 | 842 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-168 | 36 | 342 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 23 | 843 | 822 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA18137.1 | 0 | 1 | 853 | 4 | 853 | beta-galactosidase like protein [Arabidopsis thaliana] |
EMBL | CAB16852.1 | 0 | 1 | 853 | 1 | 853 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | NP_568001.1 | 0 | 1 | 853 | 4 | 856 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | NP_849506.1 | 0 | 1 | 853 | 4 | 855 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002310279.1 | 0 | 1 | 852 | 1 | 846 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 34 | 338 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0004 | 476 | 733 | 387 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3.00004e-41 | 30 | 354 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3.00004e-41 | 30 | 354 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |