Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G025700.1 |
Family | GH35 |
Protein Properties | Length: 828 Molecular Weight: 92072.3 Isoelectric Point: 4.7456 |
Chromosome | Chromosome/Scaffold: 01 Start: 1896466 End: 1901147 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 35 | 336 | 0 |
IIDGKHRVLVSGSIHYPRSTTQMWPDLMKKSREGGLDAIETYVFWNAHEPARRQYDFSGNLDLVRFLKAIQDEGLYAVLRIGPYVCAEWNYGGFPVWLHN MPGIQMRTDNDVFKNEMQNFTTLIVDMVKRENLFASQGGPVILAQIENEYGNVMSSYGEEGKAYMNWCANMAQSLDIGVPWLMCQQDDAPEPMISTCNGW YCDQYQPRRSNIPKMWTENWTGWYKNWGGKDPHRTAEDLAFAVARFYQLGGTFQNYYMYHGGTNFGRSAGGPYITTSYDYDAPLDEYGNLNQPKWGHLKQ LH |
Full Sequence |
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Protein Sequence Length: 828 Download |
MSSSGILALF IVCFCTSGRL WATATQVTYD NRAIIIDGKH RVLVSGSIHY PRSTTQMWPD 60 LMKKSREGGL DAIETYVFWN AHEPARRQYD FSGNLDLVRF LKAIQDEGLY AVLRIGPYVC 120 AEWNYGGFPV WLHNMPGIQM RTDNDVFKNE MQNFTTLIVD MVKRENLFAS QGGPVILAQI 180 ENEYGNVMSS YGEEGKAYMN WCANMAQSLD IGVPWLMCQQ DDAPEPMIST CNGWYCDQYQ 240 PRRSNIPKMW TENWTGWYKN WGGKDPHRTA EDLAFAVARF YQLGGTFQNY YMYHGGTNFG 300 RSAGGPYITT SYDYDAPLDE YGNLNQPKWG HLKQLHDLLH SMEDILTTGN VSSVDLGDDS 360 VWGTIYSNEG GSSCFLANVD QGTDKTINFQ GINYTVPAWS VSILPDCQNV SYNTAKVSTQ 420 TSVMVKKANV AEDEPISLKW SWRPEMDDKT ILLGKGDVTI NQILDQKEAA NDLSDYLFYM 480 TSINLKKDDP VWSYNMTLRV KSSGQILHAF VNGELIGSQW SKNGGESFVF EQNVKLNHKK 540 NTISLLSATV GFTNYGANFD LVPSGITGPV ELIGYHGDDE TVAKDLSSQK WSYKIGLEGL 600 NQELYSSQSL KWQEDSFPVN RTLTWYKTVF KAPLGTDPVV VDLLGMGKGL AWVNGNSIGR 660 YWPSFIAEGD CNLEPCDYRG SYDSSKCLSN CGHPTQRWYH VPRSFLNDTG DNTLVLFEEF 720 GGNPSSVNFQ TIAIGSACIS AEENRKIELS CQGRSISAVK FASFGNPQGA CGSFVKGFCE 780 GSKDALSVVE KACVGQESCT IDVSEDTFSS TTCGDDVIKT LSVEAIC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 8.0e-7 | 49 | 210 | 183 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 5.0e-15 | 749 | 827 | 84 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 4.0e-21 | 27 | 329 | 357 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-160 | 33 | 336 | 319 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 6 | 827 | 848 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 8 | 827 | 14 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 10 | 827 | 24 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 8 | 827 | 6 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 9 | 827 | 7 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 2 | 827 | 27 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 34 | 335 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99995e-41 | 26 | 326 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99995e-41 | 26 | 326 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |