Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10025980 |
Family | GH35 |
Protein Properties | Length: 850 Molecular Weight: 94314 Isoelectric Point: 6.8282 |
Chromosome | Chromosome/Scaffold: 319 Start: 172185 End: 176459 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 39 | 341 | 0 |
VINGERRILFSGSIHYPRSTPDMWEDLIQKAKDGGVDVIETYVFWNVHELSPGNYNFEGRNDLVRFIKTIHKAGLYAHLRIGPYVCAEWNFGGFPVWLKY IPGISFRTDNEPFKRAMQGFTEKIVGLMKSESLFESQGGPIILSQIENEYGAQSKMLGADGYNYMSWAANMAVKMGTGVPWVMCKEDDAPDPVINTCNGF YCDTFAPNKPYKPTLWTEAWSGWFSEFGGPNHQRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPLDEYGLIRQPKYGHLKE LHR |
Full Sequence |
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Protein Sequence Length: 850 Download |
MGTQSFSKLL CRLLLWCLFG LLGSMHVQAI VTYDRKAIVI NGERRILFSG SIHYPRSTPD 60 MWEDLIQKAK DGGVDVIETY VFWNVHELSP GNYNFEGRND LVRFIKTIHK AGLYAHLRIG 120 PYVCAEWNFG GFPVWLKYIP GISFRTDNEP FKRAMQGFTE KIVGLMKSES LFESQGGPII 180 LSQIENEYGA QSKMLGADGY NYMSWAANMA VKMGTGVPWV MCKEDDAPDP VINTCNGFYC 240 DTFAPNKPYK PTLWTEAWSG WFSEFGGPNH QRPVEDLAFA VARFIQKGGS FVNYYMYHGG 300 TNFGRSAGGP FITTSYDYDA PLDEYGLIRQ PKYGHLKELH RAIKMCERAL VSADPVMTQL 360 GAYQQAHVYS TKPGGDCAAF LANYDTKSAT KVMFNNVHFN LPPWSISILP DCRNVVFNTA 420 KVGVQTSQME MLPTNTEIPS WESYDEDVSS VSDGSTLATS GLLEQINVTR DISDYLWYIT 480 SVDIDASESF LRGGEMPTLI VQSSGHAVHV FINGELSGSA FGTREDRKFT YRGKVNLRSR 540 MNKIALLSVA VGLPNVGGHF ETWYTGVSGP VVLHGLDQGK LDLSWQTWSY QVGLKGEALS 600 LLSPTGVSSV EWMQSAEKQQ QPLSWHKSHF NAPEGDEPLA LDLEGMGKGQ IWINGQSIGR 660 YWTAHAVGQC NGCSYTGSFR PPKCQLGCGQ PTQRWYHVPR SWLKPTQNLL VVFEELGGDP 720 SSISLVKRSV TTVCAEVAEF HPTLENWQIE ENGRTEEFHS PKVHLQCNKG QSISFIKFAS 780 FGTPLGTCGS YQQGTCHAST SSNILEKNCI GKQRCAVTIA NNNFGQDPCP NVLKKLSVEA 840 FCAPTNLKV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0002 | 53 | 136 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-20 | 31 | 333 | 361 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-22 | 765 | 842 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 2.0e-165 | 37 | 343 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 843 | 820 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 1 | 844 | 1 | 841 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 27 | 844 | 24 | 842 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAB16852.1 | 0 | 12 | 844 | 9 | 844 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | XP_002274449.1 | 0 | 1 | 844 | 1 | 842 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 848 | 1 | 846 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 35 | 339 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.00008 | 498 | 733 | 399 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99995e-41 | 31 | 414 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99995e-41 | 31 | 414 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |