Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_93.34 |
Family | GH35 |
Protein Properties | Length: 722 Molecular Weight: 80955.5 Isoelectric Point: 8.1365 |
Chromosome | Chromosome/Scaffold: 93 Start: 875627 End: 879841 |
Description | beta-galactosidase 12 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 31 | 333 | 0 |
IINGRRRILISGSIHYPRSTPQMWPDLIQNAKEGGLDVIQTYVFWNGHEPSPGNYYFEDRYDLVKFIKLVHQAGLYVHLRIGPYICGEWNFGGFPVWLKY VPGIQFRTDNGPFKAQMQKFTEKIVNMMKAEKLFEPQGGPIIMSQIENEYGPIEWEIGAPGKAYTKWAAQMAVGLGTGVPWIMCKQEDAPDPIIDTCNGF YCENFMPNANYKPKMFTEAWTGWYTEFGGPVPYRPAEDMAYSVARFIQNRGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLRREPKWGHLRD LHK |
Full Sequence |
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Protein Sequence Length: 722 Download |
MLKTNLVLFL LFCSWLWSVE ATVSYDHKAI IINGRRRILI SGSIHYPRST PQMWPDLIQN 60 AKEGGLDVIQ TYVFWNGHEP SPGNYYFEDR YDLVKFIKLV HQAGLYVHLR IGPYICGEWN 120 FGGFPVWLKY VPGIQFRTDN GPFKAQMQKF TEKIVNMMKA EKLFEPQGGP IIMSQIENEY 180 GPIEWEIGAP GKAYTKWAAQ MAVGLGTGVP WIMCKQEDAP DPIIDTCNGF YCENFMPNAN 240 YKPKMFTEAW TGWYTEFGGP VPYRPAEDMA YSVARFIQNR GSFINYYMYH GGTNFGRTAG 300 GPFIATSYDY DAPLDEYGLR REPKWGHLRD LHKTIKLCEP SLVSVDPKVT SLGSNQEAHV 360 FWTKTSCAAF LANYDLKYSV RVTFQNLPYD LPPWSVSILP DCKTVVFNTA KVVSQGSLAK 420 MIAVNSAFSW QSYNEETPSA NYDAVFTKDG LWEQISVTRD ATDYLWYMTD VTIGPDEAFL 480 KNGQDPILTV MSAGHALHVF VNGQLSGTVY GQLENPKLAF SGKVKLRAGV NKVSLLSIAV 540 GLPNVGLHFE TWNAGVLGPV TLKGVNSGTW DMSKWKWSYK IGLKGEALSL HTVSGSSSVE 600 WVEGSLLAQR QPLIWYKTTF NAPVGNDPLA LDMNSMGKGQ IWINGQSIGR HWPGYKARGS 660 CGACNYAGIY DEKKCHSNCG KASQRWYHVP RSWLNPTANL LVVFEEWGGD PTKISLVKRV 720 V* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-5 | 45 | 181 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 6.0e-22 | 23 | 325 | 361 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-160 | 29 | 335 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 6 | 719 | 714 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC77377.1 | 0 | 1 | 721 | 1 | 721 | beta-galactosidase precursor [Carica papaya] |
GenBank | ABY71826.1 | 0 | 5 | 719 | 9 | 724 | beta-galactosidase [Prunus salicina] |
GenBank | ACC78255.1 | 0 | 1 | 721 | 1 | 721 | beta-galactosidase [Carica papaya] |
RefSeq | XP_002308268.1 | 0 | 18 | 721 | 23 | 726 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514108.1 | 0 | 15 | 721 | 22 | 728 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 9.94922e-44 | 20 | 331 | 5 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99995e-41 | 23 | 348 | 11 | 348 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99995e-41 | 23 | 348 | 11 | 348 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO780602 | 660 | 73 | 720 | 0 |
HO778160 | 722 | 3 | 721 | 0 |
HO795552 | 523 | 113 | 635 | 0 |
HO795552 | 68 | 7 | 74 | 6.00036e-42 |
HO795552 | 40 | 74 | 113 | 6.00036e-42 |
Sequence Alignments (This image is cropped. Click for full image.) |
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