Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G159800.1 |
Family | GH35 |
Protein Properties | Length: 732 Molecular Weight: 82133.2 Isoelectric Point: 7.4652 |
Chromosome | Chromosome/Scaffold: 04 Start: 18063219 End: 18069169 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 35 | 338 | 0 |
LIINGQRKVLFSGSIHYPRSTPEMWEGLIQKAKDGGLDVIDTYVFWNLHEPSPGNYNFDGRYDLVRFIKLVHEAGLYVHLRIGPYICAEWNFGGFPVWLK YVPGISFRTDNEPFKSAMQKFTQKIVQMMKDENLFESQGGPIILSQIENEYEPESKAFGSPGHAYMTWAAHMAISMDTGVPWVMCKEFDAPDPVINTCNG FYCDYFSPNKPYKPTMWTEAWTGWFTDFGGPNHQRPAEDLAFAVARFIQKGGSLVNYYMYHGGTNFGRTSGGPFITTSYDYDAPIDEYGLIRQPKYGHLK ELHK |
Full Sequence |
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Protein Sequence Length: 732 Download |
MAANSTTKWL FSLSVVLLTS LQLIQCNVTY DKKALIINGQ RKVLFSGSIH YPRSTPEMWE 60 GLIQKAKDGG LDVIDTYVFW NLHEPSPGNY NFDGRYDLVR FIKLVHEAGL YVHLRIGPYI 120 CAEWNFGGFP VWLKYVPGIS FRTDNEPFKS AMQKFTQKIV QMMKDENLFE SQGGPIILSQ 180 IENEYEPESK AFGSPGHAYM TWAAHMAISM DTGVPWVMCK EFDAPDPVIN TCNGFYCDYF 240 SPNKPYKPTM WTEAWTGWFT DFGGPNHQRP AEDLAFAVAR FIQKGGSLVN YYMYHGGTNF 300 GRTSGGPFIT TSYDYDAPID EYGLIRQPKY GHLKELHKAI KLCEKALLAA DSTVTSLGSY 360 EQAHVFSSDS GGCAAFLSNY NTKQAARVKF NNIQYSLPPW SISILPDCKN VVFNTAHVGV 420 QTSQVHMLPT DSELLSWETF NEDISSVDDD KMITVAGLLE QLNITRDTSD YLWYTTSVHI 480 SSSESFLRGG RLPVLTVQSA GHALHVFING ELSGSAHGTR EQRRFTFTED MKFHAGKNRI 540 SLLSVAVGLP NNGPRFETWN TGILGPVTLH GLDEGQRDLT WQKWSYKVGL KGEDMNLRSR 600 KSVSLVDWIQ GSLMVGKQQP LTWYKAYFNS PKGDDPLALD MGSMGKGQVW INGHSIGRYW 660 TLYAEGNCSG CSYSATFRPA RCQLGCGQPT QKWYHVPRSW LKSTRNLLVL FEEIGGDASR 720 ISLVKRLVTS H* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-5 | 50 | 133 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-22 | 28 | 330 | 361 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-170 | 34 | 340 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 24 | 730 | 708 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91085.1 | 0 | 1 | 730 | 1 | 733 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAF31234.1 | 0 | 11 | 730 | 12 | 732 | beta-D-galactosidase [Persea americana] |
EMBL | CBI38026.1 | 0 | 1 | 730 | 1 | 729 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002305449.1 | 0 | 1 | 731 | 1 | 731 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512959.1 | 0 | 1 | 730 | 1 | 731 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 32 | 336 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0008 | 593 | 715 | 465 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 7.00005e-41 | 28 | 344 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 7.00005e-41 | 28 | 344 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |