Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb01g046160.1 |
Family | GH35 |
Protein Properties | Length: 843 Molecular Weight: 92746.9 Isoelectric Point: 6.5032 |
Chromosome | Chromosome/Scaffold: 1 Start: 69213920 End: 69220045 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 35 | 337 | 0 |
LIDGQRRILFSGSIHYPRSTPDMWEGLIQKAKDGGLDVIQTYVFWNGHEPTPGNYYFEERYDLVRFIKTVQKAGLFVHLRIGPYICGEWNFGGFPVWLKY VPGISFRTDNEPFKTAMQGFTEKIVGMMKSEKLFASQGGPIILSQIENEYGPEGKELGAAGQAYINWAAKMAIGLGTGVPWVMCKEEDAPDPVINACNGF YCDAFSPNKPYKPTMWTEAWSGWFTEFGGTIRQRPVEDLAFAVARFVQKGGSFINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLVREPKHSHLKE LHR |
Full Sequence |
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Protein Sequence Length: 843 Download |
MGRWWQAALL GCAVAVAVLA AAVECAVTYD KKAVLIDGQR RILFSGSIHY PRSTPDMWEG 60 LIQKAKDGGL DVIQTYVFWN GHEPTPGNYY FEERYDLVRF IKTVQKAGLF VHLRIGPYIC 120 GEWNFGGFPV WLKYVPGISF RTDNEPFKTA MQGFTEKIVG MMKSEKLFAS QGGPIILSQI 180 ENEYGPEGKE LGAAGQAYIN WAAKMAIGLG TGVPWVMCKE EDAPDPVINA CNGFYCDAFS 240 PNKPYKPTMW TEAWSGWFTE FGGTIRQRPV EDLAFAVARF VQKGGSFINY YMYHGGTNFG 300 RTAGGPFITT SYDYDAPIDE YGLVREPKHS HLKELHRAVK LCEQALVSVD PAITTLGTMQ 360 EAHVFRSPSG CAAFLANYNS NSYAKVVFNN EQYSLPPWSI SILPDCKNVV FNSATVGVQT 420 SQMQMWGDGA SSMMWERYDE EVDSLAAAPL LTTTGLLEQL NVTRDSSDYL WYITSVDISP 480 SENFLQGGGK PLSLSVLSAG HALHVFVNGE LQGSAYGTRE DRRIKYNGNA NLRAGTNKIA 540 LLSVACGLPN VGVHYETWNT GVGGPVGLHG LNEGSRDLTW QTWSYQVGLK GEQMNLNSLE 600 GSTSVEWMQG SLIAQNQQPL SWYRAYFETP SGDEPLALDM GSMGKGQIWI NGQSIGRYWT 660 AYADGDCKEC SYTGTFRAPK CQAGCGQPTQ RWYHVPRSWL QPTRNLLVVF EELGGDSSKI 720 ALVKRSVSSV CADVSEDHPN IKNWQIESYG EREYHRAKVH LRCSPGQSIS AIKFASFGTP 780 MGTCGNFQQG DCHSANSHTV LEKKCIGLQR CAVAISPESF GGDPCPRVTK RVAVEAVCSP 840 TA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 5.0e-19 | 29 | 328 | 365 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 3.0e-21 | 761 | 838 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-163 | 35 | 339 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 28 | 839 | 813 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM22973.1 | 0 | 24 | 842 | 24 | 843 | AF499737_1 beta-galactosidase [Oryza sativa Japonica Group] |
GenBank | ACN29095.1 | 0 | 57 | 842 | 29 | 815 | unknown [Zea mays] |
GenBank | EEE58382.1 | 0 | 24 | 842 | 24 | 851 | hypothetical protein OsJ_09539 [Oryza sativa Japonica Group] |
RefSeq | NP_001049068.1 | 0 | 24 | 842 | 24 | 841 | Os03g0165400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465807.1 | 0 | 24 | 842 | 24 | 842 | hypothetical protein SORBIDRAFT_01g046160 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.8026e-45 | 31 | 335 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 5e-40 | 27 | 326 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 5e-40 | 27 | 326 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |