Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10025536m |
Family | GH35 |
Protein Properties | Length: 888 Molecular Weight: 99347 Isoelectric Point: 7.9379 |
Chromosome | Chromosome/Scaffold: 4 Start: 8725829 End: 8731808 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 45 | 348 | 0 |
LIIAGKRRMLFSAGIHYPRATPEMWSDLIAKSKEGGADVIQTYVFWSGHEPVKGQYNFEGRYDLVKFVKLIGSSGLYLHLRIGPYVCAEWNFGGFPVWLR DIPGIEFRTDNEPFKKEMQRFVTKIVDLMREAKLFCWQGGPVIMLQIENEYGDVEKSYGQKGKDYVKWAASMALGLGAGVPWVMCKQTDAPENIIDACNG YYCDGFKPNSPKKPVLWTEDWDGWYTRWGGSLPHRPAEDLAFAVARFYQRGGSFQNYYMYFGGTNFGRTSGGPFYITSYDYDAPLDEYGLRSEPKWGHLK DLHA |
Full Sequence |
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Protein Sequence Length: 888 Download |
MAESIRIFSL QWRILSPMIA LLLFSPIVSG NFFEPFNVSY DHRALIIAGK RRMLFSAGIH 60 YPRATPEMWS DLIAKSKEGG ADVIQTYVFW SGHEPVKGQY NFEGRYDLVK FVKLIGSSGL 120 YLHLRIGPYV CAEWNFGGFP VWLRDIPGIE FRTDNEPFKK EMQRFVTKIV DLMREAKLFC 180 WQGGPVIMLQ IENEYGDVEK SYGQKGKDYV KWAASMALGL GAGVPWVMCK QTDAPENIID 240 ACNGYYCDGF KPNSPKKPVL WTEDWDGWYT RWGGSLPHRP AEDLAFAVAR FYQRGGSFQN 300 YYMYFGGTNF GRTSGGPFYI TSYDYDAPLD EYGLRSEPKW GHLKDLHAAI KLCEPALVAA 360 DAPQYRKLGS NQEAHIYHGD GETGRKVCAA FLANIDEHKS AHVKFNGQSY TLPPWSVSIL 420 PDCRQVAFNT AKVGAQTSVK MVEPARSSLG SMSILQKVVR QEKVSYISKS WMALKEPIGI 480 WGENNFTFQG LLEHLNVTKD RSDYLWHKTR IIVTEDDISF WRKNGANPTV SVDSMRDVLR 540 VFVNKQLSGS VVGHWVKAVQ PVSFVQGNND LLLLTQTVGL QNYGAFLEKD GAGFRGKVKL 600 TGFKNGDVDL SKSSWTYQVG LKGEAEKIYT IEHNEKAAWS TLEADVSPSI FMWYKTYFDT 660 PDGTDPVVLD LESMGKGQAW VNGHHIGRYW NISSQKDGCE RGCDYRGAYN SDKCTTNCGK 720 PTQTRYHVPR SWLKPSSNLL VLFEETGGNP FKISVKTVTA GILCGQVSEL HYPPLRKWST 780 PDYMNGTMLI NSVAPEVHLH CEDGHVISSI EFASYGTPRG SCDKFSIGKC HASNSLSIVS 840 EACKGRNSCF IEVSNTAFRS DPCSGILKTL AVMAQCSPTQ NTSDLGF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-5 | 60 | 196 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-22 | 38 | 340 | 367 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-24 | 799 | 876 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 5.0e-163 | 44 | 350 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 37 | 877 | 848 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91079.1 | 0 | 24 | 886 | 22 | 891 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAE72075.1 | 0 | 24 | 887 | 22 | 891 | pear beta-galactosidase3 [Pyrus communis] |
RefSeq | NP_565755.1 | 0 | 1 | 887 | 1 | 887 | BGAL9 (Beta galactosidase 9); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002328900.1 | 0 | 21 | 881 | 19 | 885 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518051.1 | 0 | 28 | 887 | 30 | 894 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.8026e-45 | 44 | 346 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.00001 | 529 | 763 | 399 | 589 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 5e-39 | 36 | 365 | 9 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 5e-39 | 36 | 365 | 9 | 349 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 746 | 19 | 759 | 0 |
HO780602 | 631 | 88 | 713 | 0 |
HO795552 | 551 | 128 | 673 | 0 |
HO795552 | 53 | 37 | 89 | 3e-28 |
HO780602 | 35 | 713 | 747 | 0.00002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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