Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G144500.5 |
Family | GH35 |
Protein Properties | Length: 804 Molecular Weight: 89184.1 Isoelectric Point: 6.813 |
Chromosome | Chromosome/Scaffold: 06 Start: 12262304 End: 12268650 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 35 | 337 | 0 |
IINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGVDVIQTYVFWNGHEPSPGNYYFEDRYDLVKFIKLVQQAGLYLHLRIGPYICAEWNFGGFPVWLKY VPGIEFRTDNGPFKAAMQKFTEKIVGMMKSEKLFENQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWIMCKQEDAPDPMIDTCNGF YCENFKPNKDYKPKIWTEAWTGWYTEFGGAVPHRPAEDMAFSVARFIQNGGSYINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEFGLPREPKWGHLRD LHK |
Full Sequence |
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Protein Sequence Length: 804 Download |
MWNVFLLLLL QLLFFFSSRI STVTASVSYD HKAVIINGQR RILISGSIHY PRSTPEMWPD 60 LIQKAKDGGV DVIQTYVFWN GHEPSPGNYY FEDRYDLVKF IKLVQQAGLY LHLRIGPYIC 120 AEWNFGGFPV WLKYVPGIEF RTDNGPFKAA MQKFTEKIVG MMKSEKLFEN QGGPIILSQI 180 ENEYGPVEWE IGAPGKAYTK WAADMAVKLG TGVPWIMCKQ EDAPDPMIDT CNGFYCENFK 240 PNKDYKPKIW TEAWTGWYTE FGGAVPHRPA EDMAFSVARF IQNGGSYINY YMYHGGTNFG 300 RTAGGPFIAT SYDYDAPLDE FGLPREPKWG HLRDLHKAIK LCEPALVSVD PTVTSLGSNQ 360 EAHVFKSKSV CAAFLANYDT KYSVKVTFGN GQYELPPWSV SILPDCKTAV YNTARLGSQS 420 SQMKMVPASS SFSWQSYNEE TASADDDDTT TMNGLWEQIN VTRDATDYLW YLTDVKIDAD 480 EGFLKSGQNP LLTIFSAGHA LHVFINGQLA GTAYGGLSNP KLTFSQNIKL TEGINKISLL 540 SVAVGLPNVG LHFETWNAGV LGPITLKGLN EGTRDLSGQK WSYKIGLKGE SLSLHTASGS 600 ESVEWVEGSL LAQKQALTWY KTAFDAPQGN DPLALDMSSM GKGQMWINGQ NIGRHWPGYI 660 AHGSCGDCNY AGTFDDKKCR TNCGEPSQRW YHVPRSWLKP SGNLLAVFEE WGGDPTGISF 720 VKRTTASVCA DIFEGQPALK NWQAIASGKV ISPQPKAHLW CPTGQKISQI KFASFGMPQG 780 TCGSFREGSC HAHKSYDAFE RVL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0005 | 49 | 185 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 8.0e-5 | 759 | 800 | 46 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 5.0e-23 | 27 | 329 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-164 | 35 | 339 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 17 | 801 | 785 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32546.1 | 0 | 23 | 801 | 24 | 800 | beta-galactosidase protein 1 [Prunus persica] |
GenBank | ABY71826.1 | 0 | 1 | 801 | 1 | 800 | beta-galactosidase [Prunus salicina] |
RefSeq | XP_002282132.1 | 0 | 1 | 801 | 1 | 800 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308268.1 | 0 | 1 | 801 | 1 | 802 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514108.1 | 0 | 20 | 801 | 23 | 804 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 9.80909e-45 | 35 | 335 | 16 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4.00001e-40 | 27 | 335 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4.00001e-40 | 27 | 335 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |