Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G200400.2 |
Family | GH35 |
Protein Properties | Length: 838 Molecular Weight: 92389 Isoelectric Point: 7.7366 |
Chromosome | Chromosome/Scaffold: 01 Start: 19554315 End: 19561800 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 334 | 0 |
TINGQRRILISGSIHYPRSSPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVKEAGLYVNLRIGPYICAEWNFGHQFQNGQW PFQGEAAQMRKFTTKIVNMMKAERLFESQGGPIILSQIENEYGPMEYELGSPGQAYTKWAAQMAVGLRTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPN KAYKPKMWTEAWTGWFTQFGGPVPHRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHR |
Full Sequence |
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Protein Sequence Length: 838 Download |
MALKKIPMSN DNASVVFLVF LASLVCSVTA SVSYDSKAIT INGQRRILIS GSIHYPRSSP 60 EMWPDLIQKA KEGGLDVIQT YVFWNGHEPS PGKYYFEGNY DLVKFVKLVK EAGLYVNLRI 120 GPYICAEWNF GHQFQNGQWP FQGEAAQMRK FTTKIVNMMK AERLFESQGG PIILSQIENE 180 YGPMEYELGS PGQAYTKWAA QMAVGLRTGV PWVMCKQDDA PDPIINTCNG FYCDYFSPNK 240 AYKPKMWTEA WTGWFTQFGG PVPHRPAEDM AFSVARFIQK GGSFINYYMY HGGTNFGRTA 300 GGPFIATSYD YDAPLDEYGL LRQPKWGHLK DLHRAIKLCE PALVSGDATV IPLGNYQEAH 360 VFNYKAGGCA AFLANYHQRS FAKVSFRNMH YNLPPWSISI LPDCKNTVYN TARVGAQSAT 420 IKMTPVPMHG GLSWQTYNEE PSSSGDNTFT MVGLLEQINT TRDVSDYLWY MTDVHIDPSE 480 GFLKSGKYPV LTVLSAGHAL HVFINGQLSG TAYGSLDFPK LTFSQGVSLR AGVNKISLLS 540 IAVGLPNVGP HFETWNAGIL GPVTLNGLNE GRMDLSWQKW SYKIGLHGEA LSLHSISGSS 600 SVEWAEGSLV AQKQPLSWYK TTFNAPAGNS PLALDMGSMG KGQIWINGQH VGRHWPAYKA 660 SGTCGECTYI GTYNENKCST NCGEASQRWY HVPQSWLKPT GNLLVVFEEW GGDPNGVSLV 720 RREVDSVCAD IYEWQPTLMN YQMQASGKVN KPLRPKAHLS CGPGQKIRSI KFASFGTPEG 780 VCGSYNQGSC HAFHSYDAFN NLCVGQNSCS VTVAPEMFGG DPCPSVMKKL AAEAICS* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-5 | 54 | 182 | 144 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-21 | 32 | 326 | 360 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 4.0e-21 | 759 | 836 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-146 | 38 | 336 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 29 | 837 | 821 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 1 | 837 | 1 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
EMBL | CAC44500.1 | 0 | 23 | 837 | 21 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | XP_002327432.1 | 0 | 9 | 837 | 3 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329051.1 | 0 | 8 | 837 | 1 | 830 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 3 | 837 | 1 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-38 | 41 | 332 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.005 | 485 | 655 | 394 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-35 | 31 | 323 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-35 | 31 | 323 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |