Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G159800.2 |
Family | GH35 |
Protein Properties | Length: 717 Molecular Weight: 80461.3 Isoelectric Point: 7.4511 |
Chromosome | Chromosome/Scaffold: 04 Start: 18062528 End: 18069246 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 41 | 323 | 0 |
RKMWEGLIQKAKDGGLDVIDTYVFWNLHEPSPGNYNFDGRYDLVRFIKLVHEAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGISFRTDNEPFKSAMQKF TQKIVQMMKDENLFESQGGPIILSQIENEYEPESKAFGSPGHAYMTWAAHMAISMDTGVPWVMCKEFDAPDPVINTCNGFYCDYFSPNKPYKPTMWTEAW TGWFTDFGGPNHQRPAEDLAFAVARFIQKGGSLVNYYMYHGGTNFGRTSGGPFITTSYDYDAPIDEYGLIRQPKYGHLKELHK |
Full Sequence |
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Protein Sequence Length: 717 Download |
MAANSTTKWL FSLSVVLLTS LQLIQCNVTY DKKALIINGQ RKMWEGLIQK AKDGGLDVID 60 TYVFWNLHEP SPGNYNFDGR YDLVRFIKLV HEAGLYVHLR IGPYICAEWN FGGFPVWLKY 120 VPGISFRTDN EPFKSAMQKF TQKIVQMMKD ENLFESQGGP IILSQIENEY EPESKAFGSP 180 GHAYMTWAAH MAISMDTGVP WVMCKEFDAP DPVINTCNGF YCDYFSPNKP YKPTMWTEAW 240 TGWFTDFGGP NHQRPAEDLA FAVARFIQKG GSLVNYYMYH GGTNFGRTSG GPFITTSYDY 300 DAPIDEYGLI RQPKYGHLKE LHKAIKLCEK ALLAADSTVT SLGSYEQAHV FSSDSGGCAA 360 FLSNYNTKQA ARVKFNNIQY SLPPWSISIL PDCKNVVFNT AHVGVQTSQV HMLPTDSELL 420 SWETFNEDIS SVDDDKMITV AGLLEQLNIT RDTSDYLWYT TSVHISSSES FLRGGRLPVL 480 TVQSAGHALH VFINGELSGS AHGTREQRRF TFTEDMKFHA GKNRISLLSV AVGLPNNGPR 540 FETWNTGILG PVTLHGLDEG QRDLTWQKWS YKVGLKGEDM NLRSRKSVSL VDWIQGSLMV 600 GKQQPLTWYK AYFNSPKGDD PLALDMGSMG KGQVWINGHS IGRYWTLYAE GNCSGCSYSA 660 TFRPARCQLG CGQPTQKWYH VPRSWLKSTR NLLVLFEEIG GDASRISLVK RLVTSH* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-5 | 41 | 118 | 79 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-17 | 41 | 315 | 333 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-154 | 34 | 325 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 24 | 715 | 708 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91085.1 | 0 | 1 | 715 | 1 | 733 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CBI38026.1 | 0 | 1 | 715 | 1 | 729 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263382.1 | 0 | 43 | 715 | 1 | 673 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305449.1 | 0 | 1 | 716 | 1 | 731 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512959.1 | 0 | 1 | 715 | 1 | 731 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.99878e-43 | 41 | 321 | 36 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0008 | 578 | 700 | 465 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-35 | 41 | 329 | 39 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-35 | 41 | 329 | 39 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |