| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10025350m |
| Family | GH35 |
| Protein Properties | Length: 847 Molecular Weight: 92354 Isoelectric Point: 8.3614 |
| Chromosome | Chromosome/Scaffold: 4 Start: 6727495 End: 6731767 |
| Description | beta-galactosidase 8 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 34 | 337 | 0 |
| LVIDGKRKILISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWSGHEPEKNKYNFEGRYDLVKFVKLAAKAGLYVHLRIGPYVCAEWNYGGFPVWLH FVPGIKFRTDNEPFKAEMQRFTTKIVDLMKQEKLYASQGGPIILSQIENEYGNIASAYGAAGKSYIKWSASMALSLDTGVPWNMCQQADAPEPMINTCNG FYCDQFTPNSNNKPKMWTENWSGWFLGFGDPSPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGSNFDRTSGGPLISTSYDYDAPIDEYGLLRQPKWGHLR DLHK | |||
| Full Sequence |
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| Protein Sequence Length: 847 Download |
| MVKGKRKMEM MLLLILQIVV AATAANVTYD HRALVIDGKR KILISGSIHY PRSTPEMWPD 60 LIQKSKDGGL DVIETYVFWS GHEPEKNKYN FEGRYDLVKF VKLAAKAGLY VHLRIGPYVC 120 AEWNYGGFPV WLHFVPGIKF RTDNEPFKAE MQRFTTKIVD LMKQEKLYAS QGGPIILSQI 180 ENEYGNIASA YGAAGKSYIK WSASMALSLD TGVPWNMCQQ ADAPEPMINT CNGFYCDQFT 240 PNSNNKPKMW TENWSGWFLG FGDPSPYRPV EDLAFAVARF YQRGGTFQNY YMYHGGSNFD 300 RTSGGPLIST SYDYDAPIDE YGLLRQPKWG HLRDLHKAIK LCEDSLIATD PTITSLGSNL 360 EAAVYKTSGS CAAFLANVGT KSDATVVFNG QSYVLPAWSV SILPDCKNVA FNTAKKNAAT 420 ESTTFAPQSL KPDGGSSAEL GSQWSYIKEP IGISKTDAFL KPGLLEQINT TADKSDYLWY 480 SLRMDIKGDE TFLDEGSKAV LHIESIGQVV YAFINGKLAG SGHDKQKISL VIPINLVPGK 540 NTIDLLSVTV GLANYGPFFD LVGAGITGPV TLKSAKSGSS IDLATQQWTY QVGLKGEDTG 600 LATGDSSEWV SKSPLPTKQP LIWYKTTFNA PSGSEPVAID FTGTGKGIAW VNGQSIGRYW 660 PTSIAANNGC TDSCDYRGSY TAKKCVKNCG KPSQTLYHVP RSWLNPSGNT LVLLEEMGGD 720 PTQISFATKQ TGSSLCLTVS QSHPPPVDTW TSDSKISNKH RTRPVLSLKC PVSTHVITSI 780 KFASFGTPKG TCGSFTYGHC SSSRSLSLVQ KACIGLRSCN VEVSTRVFGE PCRGVVKSLA 840 VEASCS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 4.0e-7 | 49 | 185 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 9.0e-23 | 768 | 845 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 6.0e-25 | 27 | 329 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-169 | 33 | 339 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 846 | 856 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD21482.1 | 0 | 30 | 846 | 29 | 839 | putative beta-galactosidase [Arabidopsis thaliana] |
| DDBJ | BAD20774.2 | 0 | 1 | 846 | 7 | 851 | beta-galactosidase [Raphanus sativus] |
| EMBL | CAB64744.1 | 0 | 30 | 846 | 35 | 852 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_850121.1 | 0 | 30 | 846 | 35 | 852 | BGAL8 (beta-galactosidase 8); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
| RefSeq | XP_002530296.1 | 0 | 7 | 846 | 3 | 842 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2.00386e-43 | 34 | 335 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0004 | 512 | 718 | 411 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3e-37 | 27 | 410 | 11 | 407 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3e-37 | 27 | 410 | 11 | 407 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
