Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10003343 |
Family | GH35 |
Protein Properties | Length: 875 Molecular Weight: 97553.2 Isoelectric Point: 8.3964 |
Chromosome | Chromosome/Scaffold: 1120 Start: 120031 End: 124502 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 357 | 0 |
LIIDGQRKLFISASIHYPRSVPAMWPGLVQTAKEGGVDVIETYVFWNGHEIAPSVYNFEGRYDLVKFVKIVQNAGMHLILRIGPFVAAEWNYGGVPVWLH YIPGTVFRTDNENFKRFMTYIVNLMKKEKLFASQGDWAAASSLQVENEYGYYEQFYGEGGKRYAMWSAQMAVAQNIGVPWIMCQQFDAPDPVIDTCNGFY CDAFKPISPHRPKIWTENWPGWFQLFGAPNPHRPAQDVAYAVARFFQKGGTVNNYYMFLSFLKKYNALTPASFCLSQYHGGTNFGRTAGGPFITTSYDYE APIDEYGMPNQPKWGHLRDLHK |
Full Sequence |
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Protein Sequence Length: 875 Download |
MEKLFSVFFF FSSWLLLFFF FEVGSAGNVT YDGRSLIIDG QRKLFISASI HYPRSVPAMW 60 PGLVQTAKEG GVDVIETYVF WNGHEIAPSV YNFEGRYDLV KFVKIVQNAG MHLILRIGPF 120 VAAEWNYGGV PVWLHYIPGT VFRTDNENFK RFMTYIVNLM KKEKLFASQG DWAAASSLQV 180 ENEYGYYEQF YGEGGKRYAM WSAQMAVAQN IGVPWIMCQQ FDAPDPVIDT CNGFYCDAFK 240 PISPHRPKIW TENWPGWFQL FGAPNPHRPA QDVAYAVARF FQKGGTVNNY YMFLSFLKKY 300 NALTPASFCL SQYHGGTNFG RTAGGPFITT SYDYEAPIDE YGMPNQPKWG HLRDLHKAIK 360 LCEKMLLTSN SINSSLGHSQ EAEVYEDGSG ACVAFLTNTD DKNDVTVMFR NSSYHLPAWS 420 VSILPDCKNE VYNTAKVTSQ ATVVKMVSEN LRSSVQSSKK DTKTPNWEVF VEKAGIWGEA 480 DLVKNGLDDH INTTKDASDY LWYTTSFTCG EDEAFLKQGR SPVLLIDSKG HALHVFVNGQ 540 LQGSASGNGT VFPFRYKKPI TLKAGKNEIS LLSITVGLPT AGPRYEWIPA GLTYVKIQGL 600 NNGTVDLSKN NWTYKIGLEG EKLAIYTPGG MNRVNWIATP NVPKMQPLTW YKAAVEPPTG 660 NEPIGLDMLN MGKGLAWLNG EEIGRYWPRK SPKNGKCVDE CDYRGKFMPD KCLTGCGKPT 720 QRWYHVPRSW FKPSGNILVI FEEKGGDPSK IKFSKRRTSG VCAAVSEDYP SYNLLPQAGN 780 ATSKTASVHL KCPEDTQISA VKFASFGTPK GTCGSYKIGD CHDPNSISSV EKECLKRNEC 840 RIEVSEEKFM SKGSCKVGGG ATMKKKLAVE VVCS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 3.0e-11 | 29 | 135 | 109 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 8.0e-13 | 790 | 873 | 87 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-126 | 35 | 359 | 344 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 28 | 874 | 854 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF70823.1 | 0 | 28 | 874 | 45 | 870 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
DDBJ | BAD91080.1 | 0 | 28 | 874 | 28 | 851 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CBI21600.1 | 0 | 26 | 874 | 20 | 847 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002310540.1 | 0 | 16 | 874 | 5 | 827 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522927.1 | 0 | 27 | 874 | 27 | 803 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-32 | 25 | 355 | 4 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-27 | 29 | 342 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-27 | 29 | 342 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |