Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_001624m |
Family | GH35 |
Protein Properties | Length: 848 Molecular Weight: 94354.9 Isoelectric Point: 6.9053 |
Chromosome | Chromosome/Scaffold: 07520 Start: 1785853 End: 1791276 |
Description | beta-galactosidase 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 338 | 0 |
VINGQRRILFSGSIHYPRSTPDMWEDLILKAKDGGIDVVETYVFWNVHEPTPGNYNFEGRYDLVRFIKTIQKAGLYGHLRIGPYICAEWNFGGFPVWLKY VPGISFRTDNEPFKRAMQGFTEKIVDLMKSEHLFESQGGPIILSQIENEYGSESKLLGAAGYNYMTWAANMALKTGTGVPWVMCKEEDAPDPVINTCNGF YCDYFSPNKPYKPTMWTEAWSGWFTEFGGPIHQRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEFGLIRQPKYGHLKE LHR |
Full Sequence |
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Protein Sequence Length: 848 Download |
MGTSSVSMLL SLVCLVMCLG SQLIQCSVTY DSKAIVINGQ RRILFSGSIH YPRSTPDMWE 60 DLILKAKDGG IDVVETYVFW NVHEPTPGNY NFEGRYDLVR FIKTIQKAGL YGHLRIGPYI 120 CAEWNFGGFP VWLKYVPGIS FRTDNEPFKR AMQGFTEKIV DLMKSEHLFE SQGGPIILSQ 180 IENEYGSESK LLGAAGYNYM TWAANMALKT GTGVPWVMCK EEDAPDPVIN TCNGFYCDYF 240 SPNKPYKPTM WTEAWSGWFT EFGGPIHQRP VEDLAFAVAR FIQKGGSFVN YYMYHGGTNF 300 GRSAGGPFIT TSYDYDAPID EFGLIRQPKY GHLKELHRSV KMCERALVST DPVVTQLGSY 360 QQAHMYSSES GDCAAFLANY DRKSTTRVLF NNMHYNLPPW SISILPDCRN VVFNTAKVGV 420 QTSQLEMLPV NADMLSWESY NEDTTSLDDS STFTALGLLE QINVTRDASD YLWYITSVDI 480 GSSESFLHGG ELPTLIVQSA GHAVHIFVNG ELSGSAFGTR ENRRFTYTGK VNLHAGKNKI 540 ALLSITVGLQ NVGGHFETWN TGIQGPVALH GLDQGKWDLT WQRWTYQVGL KGEAMNLVSP 600 NSVSSVGWMA ASLVEQRQQP LTWHKAYFNA PDGDEPLALD MEGMGKGQIW INGQSIGRYW 660 TAYATGNCNG CSYEGTFRPP KCQLGCGQPT QRWYHVPRSW LQPTQNLLVV FEELGGNPSR 720 ISLVKRSTTS VCAEVAEFHP TLKNWHIESY GRAEEFHSPK VHLRCSVGQS ISSIKFASFG 780 TPLGTCGSYQ QGPCHAPASY DIVEKKCIGK QRCTVTISNS NFGRDPCPNV LKRLSVEAVC 840 APTNWRG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 6.0e-5 | 50 | 186 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-22 | 28 | 330 | 361 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 3.0e-26 | 763 | 840 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 4.0e-165 | 34 | 338 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 24 | 841 | 819 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 1 | 842 | 1 | 841 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 24 | 842 | 24 | 842 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAB16852.1 | 0 | 1 | 846 | 1 | 852 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | XP_002274449.1 | 0 | 1 | 842 | 1 | 842 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 847 | 1 | 847 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 35 | 336 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-39 | 28 | 352 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-39 | 28 | 352 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |