Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10000803 |
Family | GH35 |
Protein Properties | Length: 684 Molecular Weight: 76432.9 Isoelectric Point: 8.3891 |
Chromosome | Chromosome/Scaffold: 1252 Start: 34856 End: 39031 |
Description | beta-galactosidase 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 35 | 325 | 0 |
LINGQRRLLLSGSIHYPRSTPQMWEDLIQKAKDGGLDCIDTYVFWNVHEPSPGNYDFEGRYDLVRFIKTIQKNGLYVHLRIGPYICAEWNFGGFPVWLKN VDGMSFRTDNQPFKMMKNEKLFASQGGPIILSQIENEYGPESKAFGAAGKSYINWAATMAVELDTGIPWVMCKEDDAPDPVINTCNGFYCDTFTPNKPYK PGLWTEAWSGWFTEFGGPNQHRPVEDLAFGVARFIQKGGTFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYSHLKELHK |
Full Sequence |
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Protein Sequence Length: 684 Download |
MGTTSVPKQL YFFFFFLCLL KLAECTVTYD NKAILINGQR RLLLSGSIHY PRSTPQMWED 60 LIQKAKDGGL DCIDTYVFWN VHEPSPGNYD FEGRYDLVRF IKTIQKNGLY VHLRIGPYIC 120 AEWNFGGFPV WLKNVDGMSF RTDNQPFKMM KNEKLFASQG GPIILSQIEN EYGPESKAFG 180 AAGKSYINWA ATMAVELDTG IPWVMCKEDD APDPVINTCN GFYCDTFTPN KPYKPGLWTE 240 AWSGWFTEFG GPNQHRPVED LAFGVARFIQ KGGTFVNYYM YHGGTNFGRS AGGPFITTSY 300 DYDAPIDEYG LIREPKYSHL KELHKAIKLC EPAVVSSDPT VTPLGTYQQG HCAAFLTNYH 360 PNHTAKVTYN HLHYDLPPWS TSILPDCRTV VYNTAKVGLQ PSHVQMLPTV RGLLEQINVT 420 RDNSDYLWYI TSVRIGSSES FLHGGPKPTL SVQSAGHALH VFINGQYSGS AFGTREDRRL 480 TFRGPVNLRH GANKIALLSV AVGLPNVGFR FETWKTGIEG PVMLHGLKKG DRDLTHHKWS 540 YQVGLRGEAL NLVSPAGVSS VEWAEDSLAA RGNQALKWHK AYFDAPGGSE PLGLDLGSMG 600 KGQAWINGQS IGRYWMAYAK GECSNGCNYA GTYRPNRCQL GCGQPTQRWY HVPRSWLKPR 660 QNLLIVLEEL GGDASKISLV KRM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 6.0e-6 | 49 | 132 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-18 | 27 | 318 | 341 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-162 | 33 | 327 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 682 | 700 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK81874.1 | 0 | 1 | 682 | 1 | 727 | putative beta-galactosidase BG1 [Vitis vinifera] |
EMBL | CAN78072.1 | 0 | 1 | 682 | 1 | 727 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280715.1 | 0 | 1 | 682 | 1 | 727 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306893.1 | 0 | 1 | 682 | 1 | 725 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510455.1 | 0 | 1 | 682 | 1 | 725 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 20 | 671 | 1 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 6.99949e-42 | 36 | 682 | 12 | 584 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 6.99949e-42 | 36 | 682 | 12 | 584 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8c_B | 6.99949e-42 | 36 | 682 | 12 | 584 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
PDB | 4e8c_A | 6.99949e-42 | 36 | 682 | 12 | 584 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |