Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10004155m |
Family | GH35 |
Protein Properties | Length: 814 Molecular Weight: 90505.4 Isoelectric Point: 7.4374 |
Chromosome | Chromosome/Scaffold: 7 Start: 1457664 End: 1462533 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 343 | 0 |
LLINGQRRILFSGSIHYPRSTPDMWESLIQKAKDGGVDVIETYVFWNLHEPSPGKYDFEGRNDLVRFVKTIHKAGLYAHLRIGPYVCAEWNFGGFPVWLK YVPGISFRTDNEPFKRAMKGFTERIVELMKSENLFESQGGPIILSQIENEYGRQGQLLGAEGHNYMTWAAKMAIATETGVPWVMCKEDDAPDPVINTCNG FYCDSFAPNKPYKPLIWTEAWSGWFTEFGGPMHHRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFVTSSYDYDAPIDEYGLIRQPKYGHLK ELHR |
Full Sequence |
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Protein Sequence Length: 814 Download |
MWGMGSGDSS SRLVLWLCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST 60 PDMWESLIQK AKDGGVDVIE TYVFWNLHEP SPGKYDFEGR NDLVRFVKTI HKAGLYAHLR 120 IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP 180 IILSQIENEY GRQGQLLGAE GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF 240 YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FAVARFIQKG GSFVNYYMYH 300 GGTNFGRTAG GPFVTSSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT 360 SLGNKQQAHV YSSESGDCSA FLANYDTESA TRVLFNNVHY NLPPWSISIL PDCRNAVFNT 420 AKVGVQTSQM EMLPTSTKDF QWQSYLEDLS SLDDSSTFTT NGLLEQINVT RDTSDYLWYM 480 TSVDIGGTES FLHGGELPTL IVQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS 540 GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALRGLSQG KRDLSWQKWT YQVGLKGEAM 600 NLAFPTNTPS FEWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES 660 IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH VPRSWLKPSQ NLLVIFEELG 720 GNPSSVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK 780 FASFGTPLGT CGSYQQGECH ATTSYAILAR VKA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02140 | Gal_Lectin | 4.0e-5 | 768 | 809 | 46 | + Galactose binding lectin domain. | ||
pfam02449 | Glyco_hydro_42 | 1.0e-6 | 55 | 191 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-21 | 33 | 335 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 8.0e-168 | 39 | 345 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 4 | 810 | 808 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA18137.1 | 0 | 1 | 810 | 1 | 804 | beta-galactosidase like protein [Arabidopsis thaliana] |
EMBL | CAB16852.1 | 0 | 4 | 810 | 1 | 807 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | NP_568001.1 | 0 | 1 | 810 | 1 | 810 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | NP_849506.1 | 0 | 1 | 810 | 1 | 810 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002310279.1 | 0 | 17 | 810 | 9 | 805 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 37 | 341 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.002 | 499 | 736 | 399 | 591 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99995e-41 | 33 | 357 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99995e-41 | 33 | 357 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |