Basic Information | |
---|---|
Species | Oryza sativa |
Cazyme ID | LOC_Os12g24170.1 |
Family | GH35 |
Protein Properties | Length: 928 Molecular Weight: 101921 Isoelectric Point: 5.9565 |
Chromosome | Chromosome/Scaffold: 12 Start: 13761534 End: 13782378 |
Description | beta galactosidase 9 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 72 | 382 | 0 |
LIGGKRRMLVSAGLHYPRATPEMWPSLIAKCKEGGADVIETYVFWNGHEPAKGQYYFEERFDLVKFAKIDLVKFAKLVAAEGLFLFLRIGPYACAEWNFG GFPVWLRDIPGIEFRTDNEPFKAEMQTFVTKIVTLMKEEKLYSWQGGPIILQQIENEYGNIQGNYGQAGKRYMQWAAQMAIGLDTGIPWVMCRQTDAPEE IIDTCNAFYCDGFKPNSYNKPTIWTEDWDGWYADWGGALPHRPAEDSAFAVARFYQRGGSLQNYYMYFGGTNFARTAGGPLQITSYDYDAPIDEYGILRQ PKWGHLKDLHT |
Full Sequence |
---|
Protein Sequence Length: 928 Download |
MAASRGPPLL GFRALALALL LAILLLLGCS AAAAYAGAEG VLRQVVGRRG DDGGGGNFFE 60 PFNVTYDHRA VLIGGKRRML VSAGLHYPRA TPEMWPSLIA KCKEGGADVI ETYVFWNGHE 120 PAKGQYYFEE RFDLVKFAKI DLVKFAKLVA AEGLFLFLRI GPYACAEWNF GGFPVWLRDI 180 PGIEFRTDNE PFKAEMQTFV TKIVTLMKEE KLYSWQGGPI ILQQIENEYG NIQGNYGQAG 240 KRYMQWAAQM AIGLDTGIPW VMCRQTDAPE EIIDTCNAFY CDGFKPNSYN KPTIWTEDWD 300 GWYADWGGAL PHRPAEDSAF AVARFYQRGG SLQNYYMYFG GTNFARTAGG PLQITSYDYD 360 APIDEYGILR QPKWGHLKDL HTAIKLCEPA LIAVDGSPQY IKLGSMQEAH VYSTGEVHTN 420 GSMAGNAQIC SAFLANIDEH KYASVWIFGK SYSLPPWSVS ILPDCENVAF NTARIGAQTS 480 VFTVESGSPS RSSRHKPSIL SLTSGGPYLS STWWTSKETI GTWGGNNFAV QGILEHLNVT 540 KDISDYLWYT TRVNISDADV AFWSSKGVLP SLTIDKIRDV ARVFVNGKLA GSQVGHWVSL 600 KQPIQLVEGL NELTLLSEIV GLQNYGAFLE KDGAGFRGQV TLTGLSDGDV DLTNSLWTYQ 660 VGLKGEFSMI YAPEKQGCAG WSRMQKDSVQ PFTWYKTMFS TPKGTDPVAI DLGSMGKGQA 720 WVNGHLIGRY WSLVAPESGC SSSCYYPGAY NERKCQSNCG MPTQNWYHIP REWLKESDNL 780 LVLFEETGGD PSLISLEAHY AKTVCSRISE NYYPPLSAWS HLSSGRASVN AATPELRLQC 840 DDGHVISEIT FASYGTPSGG CLNFSKGNCH ASSTLDLVTE ACVGNTKCAI SVSNDVFGDP 900 CRGVLKDLAV EAKCSPPSTT KEPRGEM* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 5.0e-18 | 64 | 374 | 352 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 1.0e-26 | 838 | 914 | 80 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 2.0e-144 | 72 | 384 | 328 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 63 | 915 | 865 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005488 | binding |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA97655.2 | 0 | 1 | 698 | 1 | 698 | Beta-galactosidase precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY82934.1 | 0 | 1 | 698 | 1 | 690 | hypothetical protein OsI_38151 [Oryza sativa Indica Group] |
GenBank | EEE53129.1 | 0 | 1 | 698 | 1 | 725 | hypothetical protein OsJ_35927 [Oryza sativa Japonica Group] |
RefSeq | NP_001066673.1 | 0 | 1 | 927 | 1 | 919 | Os12g0429200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002442888.1 | 0 | 41 | 927 | 48 | 923 | hypothetical protein SORBIDRAFT_08g004410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-35 | 72 | 380 | 16 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0000006 | 571 | 750 | 399 | 560 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-34 | 62 | 380 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-34 | 62 | 380 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |