Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g003076m |
Family | GH35 |
Protein Properties | Length: 851 Molecular Weight: 93918.4 Isoelectric Point: 8.1173 |
Chromosome | Chromosome/Scaffold: 00002 Start: 3323554 End: 3329348 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 339 | 0 |
LINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKY VPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGF YCDAFSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQ LHE |
Full Sequence |
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Protein Sequence Length: 851 Download |
METSSVSKLL TWLWMALLLG TELIQCSTVT YDRKAILING QRRILISGSI HYPRSTPEMW 60 EDLIRKAKDG GLDVIDTYVF WNGHEPSPGH YNFEGSYDLV RFIKTVQRVG LYAHLRIGPY 120 VCAEWNFGGF PVWLKYVPGI SFRTDNGPFK VAMQGFTQKI VQMMKNEKLF ASQGGPIILS 180 QIENEYGPES KSLGAAGHAY VNWAAKMAVG LDTGVPWVMC KEDDAPDPVI NSCNGFYCDA 240 FSPNKPYKPT LWTEAWSGWF TEFGGAVHRR PVQDLAFAVA RFIQKGGSFF NYYMYHGGTN 300 FGRTAGGPFI TTSYDYDAPL DEYGLMRQPK YGHLKQLHEA IKLCEYALVS SDPTVTSLGT 360 YQQAHVFSAG QQKCAAFLSN YNTKSAARVT FNGRQYNLPP WSISILPDCK NVVFNTAKVA 420 VQHTKMQMLP TGSKLLSWET YDEDISSLGE SSTLTAIGLL EQINITRDTS DYLWYMTSVE 480 ISSSESFLRG GQKPTLTVES AGHAVHVFIN GQFLGSAFGT RENRRFTFSG PANLRAGINK 540 IALLSIAVGL PNVGLHYETW ETGVRGAVVL HGLDHGNKDL TWQKWSYQVG LKGEAMNLVS 600 PSEATSVDWT RGSLAAQGQQ SLKWYKAYFD APTGNEPLAL DLRSMGKGQV WINGQSIGRY 660 WMAYAKGDCK TCSYAGTFRP INCQRRCGHP TQRWYHVPRS WLKPTKNLLV VFEELGGDAS 720 RISLVKRSVA RVCADAHEHH PTTDNNDIEN KGNSNSTGNA KVLLQCAPGQ SITSIEFASF 780 GTPSGTCGSF QKGTCHAPNS HAMLEKECIG QESCSIFISS GVFGTDPCPN VLKRLSVQAV 840 CSTADANTQS * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 7.0e-7 | 51 | 187 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-22 | 29 | 331 | 362 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-24 | 764 | 841 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 7.0e-167 | 35 | 341 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 27 | 842 | 817 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK81874.1 | 0 | 1 | 849 | 1 | 850 | putative beta-galactosidase BG1 [Vitis vinifera] |
EMBL | CAN78072.1 | 0 | 1 | 849 | 1 | 850 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280715.1 | 0 | 1 | 849 | 1 | 850 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306893.1 | 0 | 1 | 849 | 1 | 848 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510455.1 | 0 | 1 | 843 | 1 | 841 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 28 | 337 | 7 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 5e-40 | 29 | 353 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 5e-40 | 29 | 353 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |