Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G078400.2 |
Family | GH35 |
Protein Properties | Length: 818 Molecular Weight: 89884.9 Isoelectric Point: 7.615 |
Chromosome | Chromosome/Scaffold: 09 Start: 5636832 End: 5643786 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 335 | 0 |
VIDGKRRVLISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRNQYNFEGRNDLVKFVKLVAEAGLYVHLRIGPYVCAEWNYGGFPLWLHF IPGIKFRTDNEPFKAEMQRFTAKIVEMMKQEKLYASQGGPIILSQIENEYGNIDSAYGAAAKPYIKWAAGMAISLDTGVPWVMCQQSDAPDPIINTCNGF YCDQFTPNSNKKPKMWTENWSGWFLSFGGTVPYRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRTTGGPFIATSYDYDAPIDEYGQVRQPKWGHLRD VHK |
Full Sequence |
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Protein Sequence Length: 818 Download |
MRRRTEILVL LICLVIVTTS FASTVTYDHR AIVIDGKRRV LISGSIHYPR STPEMWPDLI 60 QKSKDGGLDV IETYVFWNLH EPVRNQYNFE GRNDLVKFVK LVAEAGLYVH LRIGPYVCAE 120 WNYGGFPLWL HFIPGIKFRT DNEPFKAEMQ RFTAKIVEMM KQEKLYASQG GPIILSQIEN 180 EYGNIDSAYG AAAKPYIKWA AGMAISLDTG VPWVMCQQSD APDPIINTCN GFYCDQFTPN 240 SNKKPKMWTE NWSGWFLSFG GTVPYRPVED LAFAVARFFQ RGGTFQNYYM YHGGTNFDRT 300 TGGPFIATSY DYDAPIDEYG QVRQPKWGHL RDVHKAIKLC EEALIATDPK ISSLGPNLEA 360 AVYKTGSGGC SAFLANIDTK SDATVNFNGN SYHLPAWSVS ILPDCKNVVL NTAKVNSMSV 420 IPSFIHESLN KNADSTDSIG SGWSWINEPV GISKASAFNK LGLLEQINTT ADKSDYLWYS 480 LSMNIKGDEP FLQDGSQTVL HVESLGHGLH AFINGKLTGS RTGNSDNAKV KVDIPITVVP 540 GKNTIDLLSL TVGLQNYGAF FDLSGAGITG PVKLNGLSNG SSIDLSSQQW TYQVGLKEED 600 SGLPSGSSSE WVSQPALPKN QPLIWYKTNF DAPTGNDPVA LDFMGMGKGE AWINGQSIGR 660 YWPAYIASNS GCTDSCDYRG PYSANKCRKN CGKPSQQLYH VPRSWLKPSG NILVLFEEMG 720 GDPTQLAFAT RKMGSLCSHV SDSHPLPMDM WGLDSKTRRA SNPTLSLSCP SPNQVISSIK 780 FASFGTPLGT CGSFSHGRCS SAKAHSIVQK VRSCCNI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02140 | Gal_Lectin | 7.0e-7 | 767 | 814 | 56 | + Galactose binding lectin domain. | ||
pfam02449 | Glyco_hydro_42 | 2.0e-7 | 47 | 201 | 172 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-24 | 25 | 327 | 367 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-171 | 31 | 337 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 19 | 810 | 798 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC44501.1 | 0 | 17 | 814 | 22 | 813 | beta-galactosidase [Fragaria x ananassa] |
EMBL | CBI16297.1 | 0 | 1 | 814 | 1 | 819 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285084.1 | 0 | 55 | 814 | 1 | 764 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314274.1 | 0 | 1 | 814 | 1 | 822 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530296.1 | 0 | 1 | 817 | 1 | 817 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 24 | 333 | 7 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0003 | 494 | 735 | 395 | 605 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-38 | 25 | 352 | 11 | 350 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 0.00001 | 517 | 664 | 409 | 571 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-38 | 25 | 352 | 11 | 350 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |