Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_001503m |
Family | GH35 |
Protein Properties | Length: 869 Molecular Weight: 95901.2 Isoelectric Point: 7.7137 |
Chromosome | Chromosome/Scaffold: 10493 Start: 1161661 End: 1166572 |
Description | beta galactosidase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 338 | 0 |
TINGQRRILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIETYVFWNGHEPSPGNYYFEDRYDLVKFIKLIQQAGLYAHLRIGPYVCAEWNFGGFPVWLKY VPGIEFRTDNGPFKAAMQKFTEKIVSMMKSEKLYETQGGPIILSQIENEFGPVEWEIGAPGKAYTKWAAEMAVGLGTGVPWVMCKQDDAPDPVINTCNGF YCENFKPNKDYKPKIWTENWTGWYTEFGGAVPYRPAEDLAFSVARFIQNGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEYGLTRDPKWGHLRD LHK |
Full Sequence |
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Protein Sequence Length: 869 Download |
MRNMSKSSLF LFLLLFFVSW VSSVTASVSY DHKAITINGQ RRILISGSIH YPRSTPEMWP 60 DLIQKAKEGG LDVIETYVFW NGHEPSPGNY YFEDRYDLVK FIKLIQQAGL YAHLRIGPYV 120 CAEWNFGGFP VWLKYVPGIE FRTDNGPFKA AMQKFTEKIV SMMKSEKLYE TQGGPIILSQ 180 IENEFGPVEW EIGAPGKAYT KWAAEMAVGL GTGVPWVMCK QDDAPDPVIN TCNGFYCENF 240 KPNKDYKPKI WTENWTGWYT EFGGAVPYRP AEDLAFSVAR FIQNGGSFVN YYMYHGGTNF 300 GRTAGGPFIA TSYDYDAPID EYGLTRDPKW GHLRDLHKAI KLCEPALVSV DPTVTSLGSN 360 QEAHVFKSKS SCAAFLANYD TKYSVKVTFG SGQYDLPPWS ISILPDCKTA VFNTARLGAQ 420 STQMKMTPVG SAFSWQSYIE EAASGYTDDT TTLDGLWEQI NVTRDATDYL WYMTNVKIDP 480 SEGFLKSGQD PLLTVYSAGH SLHVFINGQL SGGLNGVLLV VKFLLDFLYS VVLTQQFILI 540 AGTVYGSLNS PKLTFSQNVK LNAGVNKISL LSVAVGLQNV GVHFERWNVG VLGPVTLKGL 600 NEGTTDLSGW KWSYKIGLKG EALNLHTVTG SSSVDWTEGK LLAKKQPLTW YKTTFDAPDG 660 NDPLALDMGS MGKGQIWVNG QSIGRHWPAY IARGSCGSCN YAGTYNDKKC GSNCGEPSQR 720 WYHVPRSWLK PSGNLLVVFE EWGGDASGIS LVKRTIGSVC ADIFEGQPAL KNWQMIALGK 780 LDRLQPKAHL WCPPGQKISK IKFASYGMPQ GTCGSFREGS CHAHKSYDAF EKKCVGKQSC 840 SVTVAAEVFG GNPCPDSEKK LSVEAVCS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-5 | 50 | 186 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 9.0e-22 | 790 | 867 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-22 | 30 | 330 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 8.0e-166 | 34 | 340 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 30 | 868 | 839 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32546.1 | 0 | 23 | 868 | 23 | 836 | beta-galactosidase protein 1 [Prunus persica] |
GenBank | ABY71826.1 | 0 | 19 | 868 | 18 | 836 | beta-galactosidase [Prunus salicina] |
RefSeq | XP_002282132.1 | 0 | 1 | 868 | 1 | 836 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308268.1 | 0 | 19 | 868 | 19 | 838 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514108.1 | 0 | 20 | 868 | 22 | 840 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 4.06377e-44 | 37 | 336 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-38 | 28 | 323 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-38 | 28 | 323 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |