Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.005G232600.1 |
Family | GH35 |
Protein Properties | Length: 854 Molecular Weight: 94792.5 Isoelectric Point: 8.2778 |
Chromosome | Chromosome/Scaffold: 05 Start: 24090899 End: 24096869 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 338 | 0 |
IIDGQRRILISGSIHYPRSTPDMWEDLVQKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRFDLVRFIKTVQKGGLYVHLRIGPYVCAEWNFGGFPVWLKY VPGISFRTDNGPFKAAMQGFTQKIVQMMKDERLFQSQGGPIIFSQIENEYGPESRAFGAAGHSYINWAAQMAVGLKTGVPWVMCKEDDAPDPVINTCNGF YCDAFSPNKPYKPTMWTEAWSGWFTEFGGAFHHRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYGHLKE LHR |
Full Sequence |
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Protein Sequence Length: 854 Download |
MGTSSVSKFL TLFLMVLIVG SKLIHCTVTY DKKAIIIDGQ RRILISGSIH YPRSTPDMWE 60 DLVQKAKDGG LDVIDTYVFW NVHEPSPGNY NFEGRFDLVR FIKTVQKGGL YVHLRIGPYV 120 CAEWNFGGFP VWLKYVPGIS FRTDNGPFKA AMQGFTQKIV QMMKDERLFQ SQGGPIIFSQ 180 IENEYGPESR AFGAAGHSYI NWAAQMAVGL KTGVPWVMCK EDDAPDPVIN TCNGFYCDAF 240 SPNKPYKPTM WTEAWSGWFT EFGGAFHHRP VQDLAFAVAR FIQKGGSFVN YYMYHGGTNF 300 GRSAGGPFIT TSYDYDAPID EYGLIREPKY GHLKELHRAI KLCEHELVSS DPTITLLGTY 360 QQAHVFSSGK RSCSAFLANY HTQSAARVMF NNMHYVLPPW SISILPDCRN VVFNTAKVGV 420 QTSHVQMLPT GSRFFSWESY DEDISSLGAS SRMTALGLME QINVTRDTTD YLWYITSVNI 480 NPSESFLRGG QWPTLTVESA GHALHVFING QFSGSAFGTR ENREFTFTGP VNLRAGTNRI 540 ALLSIAVGLP NVGVHYETWK TGILGPVMLH GLNQGNKDLT WQQWSYQVGL KGEAMNLVSP 600 NRASSVDWIQ GSLATRQQPL KWYKAYFDAP GGNEPLALDM RSMGKGQVWI NGQSIGRYWL 660 SYAKGDCSSC GYSGTFRPPK CQLGCGQPTQ RWYHVPRSWL KPKQNLLVIF EELGGDASKI 720 SLVKRSTTSV CADAFEHHPT IENYNTESNG ESERNLHQAK VHLRCAPGQS ISAINFASFG 780 TPTGTCGSFQ EGTCHAPNSH SVVEKKCIGR ESCMVAISNS NFGADPCPSK LKKLSVEAVC 840 STVSDTTQPN TRR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 5.0e-6 | 50 | 186 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-22 | 28 | 330 | 362 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 4.0e-24 | 763 | 840 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 3.0e-166 | 34 | 340 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 1 | 841 | 844 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK81874.1 | 0 | 1 | 852 | 1 | 854 | putative beta-galactosidase BG1 [Vitis vinifera] |
EMBL | CAN78072.1 | 0 | 1 | 852 | 1 | 854 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280715.1 | 0 | 1 | 852 | 1 | 854 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306893.1 | 0 | 1 | 853 | 1 | 853 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510455.1 | 0 | 1 | 847 | 1 | 846 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 23 | 336 | 3 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1.99993e-41 | 28 | 352 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1.99993e-41 | 28 | 352 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |