Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G200400.1 |
Family | GH35 |
Protein Properties | Length: 846 Molecular Weight: 93282.2 Isoelectric Point: 8.0246 |
Chromosome | Chromosome/Scaffold: 01 Start: 19554464 End: 19561616 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 342 | 0 |
TINGQRRILISGSIHYPRSSPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVKEAGLYVNLRIGPYICAEWNFGGFPVWLKY IPGINFRTDNGPFKAQMRKFTTKIVNMMKAERLFESQGGPIILSQIENEYGPMEYELGSPGQAYTKWAAQMAVGLRTGVPWVMCKQDDAPDPIINTCNGF YCDYFSPNKAYKPKMWTEAWTGWFTQFGGPVPHRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKD LHR |
Full Sequence |
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Protein Sequence Length: 846 Download |
MALKKIPMSN DNASVVFLVF LASLVCSVTA SVSYDSKAIT INGQRRILIS GSIHYPRSSP 60 EMWPDLIQKA KEGGLDVIQT YVFWNGHEPS PGKYYFEGNY DLVKFVKLVK EAGLYVNLRI 120 GPYICAEWNF GGFPVWLKYI PGINFRTDNG PFKAQMRKFT TKIVNMMKAE RLFESQGGPI 180 ILSQIENEYG PMEYELGSPG QAYTKWAAQM AVGLRTGVPW VMCKQDDAPD PIINTCNGFY 240 CDYFSPNKAY KPKMWTEAWT GWFTQFGGPV PHRPAEDMAF SVARFIQKGG SFINYYMYHG 300 GTNFGRTAGG PFIATSYDYD APLDEYGLLR QPKWGHLKDL HRAIKLCEPA LVSGDATVIP 360 LGNYQEAHVF NYKAGGCAAF LANYHQRSFA KVSFRNMHYN LPPWSISILP DCKNTVYNTA 420 RVGAQSATIK MTPVPMHGGL SWQTYNEEPS SSGDNTFTMV GLLEQINTTR DVSDYLWYMT 480 DVHIDPSEGF LKSGKYPVLT VLSAGHALHV FINGQLSGTA YGSLDFPKLT FSQGVSLRAG 540 VNKISLLSIA VGLPNVGPHF ETWNAGILGP VTLNGLNEGR MDLSWQKWSY KIGLHGEALS 600 LHSISGSSSV EWAEGSLVAQ KQPLSWYKTT FNAPAGNSPL ALDMGSMGKG QIWINGQHVG 660 RHWPAYKASG TCGECTYIGT YNENKCSTNC GEASQRWYHV PQSWLKPTGN LLVVFEEWGG 720 DPNGVSLVRR EVDSVCADIY EWQPTLMNYQ MQASGKVNKP LRPKAHLSCG PGQKIRSIKF 780 ASFGTPEGVC GSYNQGSCHA FHSYDAFNNL CVGQNSCSVT VAPEMFGGDP CPSVMKKLAA 840 EAICS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 5.0e-9 | 54 | 190 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 5.0e-21 | 767 | 844 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-24 | 32 | 334 | 360 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 5.0e-165 | 38 | 344 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 29 | 845 | 818 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 1 | 845 | 1 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
EMBL | CAC44500.1 | 0 | 23 | 845 | 21 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | XP_002327432.1 | 0 | 9 | 845 | 3 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329051.1 | 0 | 8 | 845 | 1 | 830 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 3 | 845 | 1 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.8026e-45 | 41 | 340 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.005 | 493 | 663 | 394 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99967e-42 | 31 | 331 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99967e-42 | 31 | 331 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |