Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10037644 |
Family | GH35 |
Protein Properties | Length: 852 Molecular Weight: 94067.4 Isoelectric Point: 9.0146 |
Chromosome | Chromosome/Scaffold: 196 Start: 869358 End: 873319 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 41 | 342 | 0 |
INGQRKILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYFFEGNYDLVKFIKLVKDAGLYVHLRIGPYVCAEWNFGGFPVWLKYI PGISFRTDNGPFKAQMQKFTTKIVNMMKTERLFENQGGPIILSQIENEYGPMEYELGASGKAYTKWAADMALQLGTGVPWVMCKQDDAPDPIINACNGFY CDYYSPNKVYKPKMWTEAWTGWFTEFGGAVPHRPAEDMAFAVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDL HR |
Full Sequence |
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Protein Sequence Length: 852 Download |
MAKNNHNVLS ILISSIFFLQ LVLCFSSVSA TVTYDSTAIK INGQRKILIS GSIHYPRSTP 60 EMWPDLIQKA KEGGLDVIQT YVFWNGHEPS PGKYFFEGNY DLVKFIKLVK DAGLYVHLRI 120 GPYVCAEWNF GGFPVWLKYI PGISFRTDNG PFKAQMQKFT TKIVNMMKTE RLFENQGGPI 180 ILSQIENEYG PMEYELGASG KAYTKWAADM ALQLGTGVPW VMCKQDDAPD PIINACNGFY 240 CDYYSPNKVY KPKMWTEAWT GWFTEFGGAV PHRPAEDMAF AVARFIQKGG SFINYYMYHG 300 GTNFGRTAGG PFIATSYDYD APLDEYGLLR QPKWGHLKDL HRAIKLCEPA LVSGIAPTVN 360 PLGRYQEARV FRTKSGVCSA FLANYNSRSY AKVSFGNMHY NLPPWSISIL PDCKNTVYNT 420 ARVGAQTSRM KMSPVPRRGG GGFSWQAYSE EPSVDGKKSF TMAGLLEQIN TTRDGTDYLW 480 YMTDVQVNSG ESFLRNRNHP VLTVKSAGHA LHVYVNDRLA GTAYGSLESP KLTFSQGVNL 540 RAGINRIAIL SIAVGLPNVG PHFETWNAGV LGPVMLTGLD EGRKDLTWQK WTYKVGMKGE 600 HLSLHSLSGS PSVEWAQGSV VSQRQPLMWY KTTFNAPAGN APLALDMATM SKGQVWINGQ 660 SVGRYWPAYK AASSGGSCGD CSYAGTYNEK KCSSNCGEPS QRWYHVPRSW LKPTGNLLVV 720 FEESGGDPNG ISLVRREVDT ICADIYEWQP TLMNYRMHAS GKANKPLQPK VHLSCGPGQK 780 MSSIKFASFG TPQGTCGSYR QGGCHAFHSY DAFNKLCVGQ NSCSVTVAPG IFGGDPCPKV 840 MKKLAVEAIC S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-7 | 54 | 190 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 3.0e-22 | 773 | 850 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 4.0e-24 | 32 | 334 | 348 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-165 | 41 | 344 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 16 | 851 | 841 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 27 | 851 | 28 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
EMBL | CAC44500.1 | 0 | 24 | 851 | 22 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | NP_187988.1 | 0 | 29 | 851 | 31 | 847 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002327432.1 | 0 | 27 | 851 | 21 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 4 | 851 | 10 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1.4013e-45 | 41 | 340 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-40 | 32 | 415 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 0.009 | 605 | 668 | 506 | 571 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-40 | 32 | 415 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |