Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.006G139100.3 |
Family | GH35 |
Protein Properties | Length: 825 Molecular Weight: 91086.2 Isoelectric Point: 6.1253 |
Chromosome | Chromosome/Scaffold: 06 Start: 11623614 End: 11628863 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 38 | 340 | 0 |
IINGQRKIILSGSIHYPRSTVEMWSDLIQKAKEGGLDTIETYIFWNAHERRRREYNFTGNLDFVKFFQKVQEAGLYGILRIGPYACAEWNYGGFPVWLHN IPEIKFRTDNEIFKNEMQTFTTKIVNMAKEAKLFASQGGPIILAQIENEYGNVMGPYGEAGKSYVQWCAQMAVAQNIGVPWIMCQQSDAPSSVINTCNGF YCDTFTPNSPKSPKMWTENWTGWYKKWGQKDPHRTAEDLAFSVARFFQYNGVLQNYYMYYGGTNFGRTSGGPFIATSYDYDAPLDEYGNLNQPKWGHLKN LHA |
Full Sequence |
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Protein Sequence Length: 825 Download |
MPGSWIGILL IASLGLIGSC SAAAAAAAAV EYDSSAVIIN GQRKIILSGS IHYPRSTVEM 60 WSDLIQKAKE GGLDTIETYI FWNAHERRRR EYNFTGNLDF VKFFQKVQEA GLYGILRIGP 120 YACAEWNYGG FPVWLHNIPE IKFRTDNEIF KNEMQTFTTK IVNMAKEAKL FASQGGPIIL 180 AQIENEYGNV MGPYGEAGKS YVQWCAQMAV AQNIGVPWIM CQQSDAPSSV INTCNGFYCD 240 TFTPNSPKSP KMWTENWTGW YKKWGQKDPH RTAEDLAFSV ARFFQYNGVL QNYYMYYGGT 300 NFGRTSGGPF IATSYDYDAP LDEYGNLNQP KWGHLKNLHA ALKLGEKILT NSTVKTTKYS 360 DGWVELTTYT SNIDGERLCF LSNTKMDGLD VDLQQDGKYF VPAWSVSILQ DCNKETYNTA 420 KVNVQTSLIV KKLHENDTPL KLSWEWAPEP TKAPLHGQGG FKATQLLEQK AATYDESDYL 480 WYMTSVDNNG TASKNVTLRV KYSGQFLHAF VNGKEIGSQH GYTFTFEKPA LLKPGTNIIS 540 LLSATVGLQN YGEFFDEGPE GIAGGPVELI DSGNTTTDLS SNEWSYKVGL NGEGGRFYDP 600 TSGRAKWVSG NLRVGRAMTW YKTTFQAPSG TEPVVVDLQG MGKGHAWVNG NSLGRFWPIL 660 TADPNGCDGK CDYRGQYKEG KCLSNCGNPT QRWYHVPRSF LNNGSNTLIL FEEIGGNPSD 720 VSFQITATET ICGNTYEGTT LELSCNGGRR IISDIQYASF GDPQGSSCGS FQRGSVEASR 780 SFSAVEKACM GKESCSINVS KATFGVEDSF GVDNNRLVVQ AVCT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0001 | 52 | 206 | 175 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-12 | 743 | 805 | 66 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-22 | 30 | 332 | 362 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-159 | 38 | 342 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 30 | 824 | 827 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 16 | 823 | 11 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 25 | 823 | 35 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002324727.1 | 0 | 60 | 788 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 1 | 824 | 1 | 824 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516256.1 | 0 | 13 | 823 | 30 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 24 | 338 | 2 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 7e-40 | 30 | 423 | 11 | 414 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 7e-40 | 30 | 423 | 11 | 414 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |