Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.043260.2 |
Family | GH35 |
Protein Properties | Length: 797 Molecular Weight: 88068.8 Isoelectric Point: 6.9741 |
Chromosome | Chromosome/Scaffold: 00542 Start: 124874 End: 130895 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 1 | 281 | 0 |
MWEGLIQKAKEGGLDVVETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYANLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMQGFTE KIVGLMKSENLFESQGGPIILSQIENEYGVQSKLFGAAGQNYMTWAAKMAVGLGTGVPWVMCKEEDAPDPVINTCNGFYCDAFSPNRPYKPTMWTEAWSG WFNEFGGPIHQRPVQDLAFAVARFIQKGGSFINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLIRQPKYGHLKELHR |
Full Sequence |
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Protein Sequence Length: 797 Download |
MWEGLIQKAK EGGLDVVETY VFWNVHEPSP GNYNFEGRYD LVRFIKTIQK AGLYANLRIG 60 PYVCAEWNFG GFPVWLKYVP GISFRTDNEP FKRAMQGFTE KIVGLMKSEN LFESQGGPII 120 LSQIENEYGV QSKLFGAAGQ NYMTWAAKMA VGLGTGVPWV MCKEEDAPDP VINTCNGFYC 180 DAFSPNRPYK PTMWTEAWSG WFNEFGGPIH QRPVQDLAFA VARFIQKGGS FINYYMYHGG 240 TNFGRTAGGP FITTSYDYDA PIDEYGLIRQ PKYGHLKELH RAVKMCEKAL VSADPIVTSL 300 GSSQQAYVYT SESGNCAAFL SNYDTDSAAR VMFNNMHYNL PPWSISILPD CRNVVFNTAK 360 VGVQTSQLEM LPTNSPMLLW ESYNEDVSAE DDSTTMTASG LLEQINVTKD TSDYLWYITS 420 VDIGSTESFL HGGELPTLIV QSTGHAVHIF INGRLSGSAF GSRENRRFTY TGKVNFRAGR 480 NTIALLSVAV GLPNVGGHFE TWNTGILGPV ALHGLDQGKL DLSWAKWTYK VGLKGEAMNL 540 VSPNGISSVE WMEGSLAAQA PQPLTWHKSN FDAPEGDEPL AIDMRGMGKG QIWINGVSIG 600 RYWTAYATGN CDKCNYAGTF RPPKCQQGCG QPTQRWYHVP RAWLKPKDNL LVVFEELGGN 660 PTSISLVKRS VTGVCADVSE YHPTLKNWHI ESYGKSEDLH RPKVHLKCSA GYSITSIKFA 720 SFGTPLGTCG SYQQGTCHAP MSYDILEKRC IGKQRCAVTI SNTNFGQDPC PNVLKRLSVE 780 VVCAPATTAA EPNWRG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 6.0e-6 | 2 | 76 | 76 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-16 | 1 | 273 | 331 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-24 | 706 | 783 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 8.0e-149 | 1 | 283 | 298 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 1 | 784 | 785 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 1 | 796 | 58 | 853 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 1 | 796 | 58 | 854 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAB16852.1 | 0 | 1 | 795 | 60 | 852 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | XP_002274449.1 | 0 | 1 | 788 | 58 | 845 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 796 | 59 | 847 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3.99931e-42 | 2 | 279 | 39 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 2e-34 | 2 | 266 | 34 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 2e-34 | 2 | 266 | 34 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 671 | 1 | 671 | 0 |
HO780602 | 659 | 21 | 670 | 0 |
HO795552 | 524 | 61 | 584 | 0 |
HO795552 | 51 | 22 | 72 | 1e-16 |
HO795552 | 22 | 1 | 22 | 1e-16 |
Sequence Alignments (This image is cropped. Click for full image.) |
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