Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_054_00116.1 |
Family | CE8 |
Protein Properties | Length: 313 Molecular Weight: 35332.7 Isoelectric Point: 8.7294 |
Chromosome | Chromosome/Scaffold: 54 Start: 1467973 End: 1470033 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 16 | 306 | 0 |
IIVAKDGGGHSKTVQGAVNMVPDHNTQRVKILIYPGIYRERVHVPRTKPYISFIGTQSDQTIITYNAKASDKDVHGHELGTFSTATVEVESDYFTATEIT IENSIDARSGGRRMQAVALKVSGDKAVFYRVKLLGSQDTLLDLSGRHYFYQCFIQGYVDFICGNAKSLYEDCTLHSIAKRSGAIAAHHRNSPEEDTGFSF VNCRVTGTGNIFLGRAWGPYARIVYSHCRFDNIIDPSGWNDWGQPSRRKTVFFGEFQCRGRGANTRKRVEWAKQFSYEEVKSFTDKNYIDG |
Full Sequence |
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Protein Sequence Length: 313 Download |
MQVNTNLELN ERTNIIIVAK DGGGHSKTVQ GAVNMVPDHN TQRVKILIYP GIYRERVHVP 60 RTKPYISFIG TQSDQTIITY NAKASDKDVH GHELGTFSTA TVEVESDYFT ATEITIENSI 120 DARSGGRRMQ AVALKVSGDK AVFYRVKLLG SQDTLLDLSG RHYFYQCFIQ GYVDFICGNA 180 KSLYEDCTLH SIAKRSGAIA AHHRNSPEED TGFSFVNCRV TGTGNIFLGR AWGPYARIVY 240 SHCRFDNIID PSGWNDWGQP SRRKTVFFGE FQCRGRGANT RKRVEWAKQF SYEEVKSFTD 300 KNYIDGEQWL RL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 7.0e-107 | 15 | 310 | 298 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 4.0e-108 | 15 | 311 | 297 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 5.0e-112 | 11 | 310 | 303 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 8.0e-122 | 16 | 312 | 299 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 3.0e-170 | 10 | 312 | 305 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE67559.1 | 0 | 11 | 312 | 70 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
RefSeq | NP_200370.1 | 0 | 20 | 312 | 86 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002264297.1 | 0 | 10 | 312 | 55 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298857.1 | 0 | 2 | 312 | 7 | 318 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522727.1 | 0 | 2 | 312 | 72 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 16 | 311 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 6.99949e-42 | 17 | 311 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 8e-24 | 14 | 299 | 32 | 353 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 8e-19 | 27 | 300 | 19 | 336 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 8e-19 | 27 | 300 | 19 | 336 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GH171677 | 251 | 63 | 313 | 0 |
EE163480 | 239 | 76 | 313 | 0 |
GO038045 | 236 | 77 | 312 | 0 |
GO040593 | 230 | 83 | 312 | 0 |
EX321231 | 290 | 13 | 301 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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