Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000258116 |
Family | CE8 |
Protein Properties | Length: 334 Molecular Weight: 36988.8 Isoelectric Point: 8.8978 |
Chromosome | Chromosome/Scaffold: 011765186 Start: 12739 End: 15154 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 39 | 324 | 0 |
TTVDKSGRGDFTSIQSAINAVPKNNRHWVSIKIKAGTYREKVTIPSDKPYIILKGENRRQTQIVWGDHDSLAQSPTFASFADNIIARSITFVNSYNNPVN SNPQMPAVAAMVAGDKLKFYRCGFFGLQDTLWDVSGRHYYKLCTIQGAVDFILGSGQSIFEKCSISVLGGALGRGVAGFITAQGRDNPKDPNGFVFKDCK VTGTGSTFLGRPWRGYSRVIFYNSNFSNVVVPEGWAPWNMVGHEEQLTYAEQECYGPGANTSKRVSWEKKLSSDTVQQFASLEFIN |
Full Sequence |
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Protein Sequence Length: 334 Download |
MSSFFQCVAL LLVGLGLFGE ADAQLYRVYG NKKIAYYTTT VDKSGRGDFT SIQSAINAVP 60 KNNRHWVSIK IKAGTYREKV TIPSDKPYII LKGENRRQTQ IVWGDHDSLA QSPTFASFAD 120 NIIARSITFV NSYNNPVNSN PQMPAVAAMV AGDKLKFYRC GFFGLQDTLW DVSGRHYYKL 180 CTIQGAVDFI LGSGQSIFEK CSISVLGGAL GRGVAGFITA QGRDNPKDPN GFVFKDCKVT 240 GTGSTFLGRP WRGYSRVIFY NSNFSNVVVP EGWAPWNMVG HEEQLTYAEQ ECYGPGANTS 300 KRVSWEKKLS SDTVQQFASL EFINADGWLS DQPF |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 1.0e-83 | 31 | 329 | 313 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 1.0e-88 | 32 | 329 | 300 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-92 | 40 | 329 | 293 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 2.0e-101 | 37 | 333 | 299 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 8.0e-165 | 32 | 333 | 306 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 35 | 333 | 41 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 41 | 333 | 36 | 332 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 34 | 333 | 27 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323773.1 | 0 | 41 | 333 | 3 | 288 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 2 | 334 | 9 | 336 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 41 | 334 | 11 | 313 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-36 | 41 | 305 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 2e-21 | 26 | 252 | 20 | 270 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 2e-16 | 49 | 301 | 18 | 315 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 2e-16 | 49 | 301 | 18 | 315 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |