Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H04905.1 |
Family | CE8 |
Protein Properties | Length: 395 Molecular Weight: 43179.7 Isoelectric Point: 7.0117 |
Chromosome | Chromosome/Scaffold: 8 Start: 69745558 End: 69747437 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 98 | 390 | 0 |
CVDRNGCCNFTTVQAAVDAAGNFSQKRTVIWINSGIYYEKVTILRTRPNITFQGQGYLSTAIAWNGTASSSGGTFYSGSVQVFSNNFMARNISFMNIAPI PNPGDVGGQAVAIRISGDQASFWGCGFFGAQDTLHDDRGRHYFRDCYIQGSIDFIFGDARSLYENCQLISIAAPVPPGQKVINGAVTAHGRASKDENTGF AFMNASIGGTGRIWLGRAWRPFSRVVFAFTTMTDIIAPEGWNDFNDATRDQTIFYGEYNCSGAGANMSLRAPYVQRLNDTQALPFLNISFIDG |
Full Sequence |
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Protein Sequence Length: 395 Download |
MGSKKTCLAV LIVVLAVFSS TNFMVPVLLS SLRDLSLDAE LFTCLSSGLS PLFGWHLGCH 60 HHRHRHKHPD DSQRTVSICD NFPPDIPPPE TNTTVTLCVD RNGCCNFTTV QAAVDAAGNF 120 SQKRTVIWIN SGIYYEKVTI LRTRPNITFQ GQGYLSTAIA WNGTASSSGG TFYSGSVQVF 180 SNNFMARNIS FMNIAPIPNP GDVGGQAVAI RISGDQASFW GCGFFGAQDT LHDDRGRHYF 240 RDCYIQGSID FIFGDARSLY ENCQLISIAA PVPPGQKVIN GAVTAHGRAS KDENTGFAFM 300 NASIGGTGRI WLGRAWRPFS RVVFAFTTMT DIIAPEGWND FNDATRDQTI FYGEYNCSGA 360 GANMSLRAPY VQRLNDTQAL PFLNISFIDG DQWL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 2.0e-92 | 90 | 394 | 313 | + pectinesterase | ||
PLN02634 | PLN02634 | 9.0e-100 | 97 | 394 | 305 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 6.0e-110 | 96 | 394 | 302 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 1.0e-120 | 94 | 394 | 308 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 0 | 43 | 394 | 352 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08648.1 | 0 | 8 | 394 | 9 | 387 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_172023.1 | 0 | 69 | 394 | 63 | 388 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002267842.1 | 0 | 1 | 394 | 1 | 393 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323171.1 | 0 | 66 | 394 | 48 | 375 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521065.1 | 0 | 50 | 394 | 47 | 391 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 97 | 394 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 7e-39 | 98 | 394 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-17 | 126 | 382 | 36 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-17 | 126 | 382 | 36 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-17 | 126 | 382 | 36 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |