Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g24750.1 |
Family | CE8 |
Protein Properties | Length: 331 Molecular Weight: 36706.6 Isoelectric Point: 8.0135 |
Chromosome | Chromosome/Scaffold: 3 Start: 24548169 End: 24552380 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 27 | 310 | 0 |
GEAFPTVQAALDAVPLGNRARTVIRLAPGVYKEPVYVPKTKNFVTLAGASAEATVISWDNTATRIKHDQTSRVIGTGTFGCGTVIVEGEDFIAENITFEN SAPQGSGQAVAVRVTADRCAFYSCRFLGWQDTLYLHYGKQYLRDCYIEGNCDFIFGNSIALLEHCHIHCKSAGYITAHSRKSSSESTGYVFLRCIITGNG EAGYIFLGRPWGPFGRVVFAHTFMDRCVKPTGWHNWDKSENERTACFYEYRCSGPGSRPSNRVAWCRQLLDVEAEQFLTHSFVD |
Full Sequence |
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Protein Sequence Length: 331 Download |
MAQQQLLQPQ QRRVLRVSRP GSVGGDGEAF PTVQAALDAV PLGNRARTVI RLAPGVYKEP 60 VYVPKTKNFV TLAGASAEAT VISWDNTATR IKHDQTSRVI GTGTFGCGTV IVEGEDFIAE 120 NITFENSAPQ GSGQAVAVRV TADRCAFYSC RFLGWQDTLY LHYGKQYLRD CYIEGNCDFI 180 FGNSIALLEH CHIHCKSAGY ITAHSRKSSS ESTGYVFLRC IITGNGEAGY IFLGRPWGPF 240 GRVVFAHTFM DRCVKPTGWH NWDKSENERT ACFYEYRCSG PGSRPSNRVA WCRQLLDVEA 300 EQFLTHSFVD PDLDRPWLLQ MMAIRIPASA * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 5.0e-84 | 23 | 312 | 305 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 4.0e-89 | 25 | 319 | 303 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 7.0e-90 | 25 | 310 | 288 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 8.0e-108 | 30 | 310 | 288 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 23 | 330 | 309 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY78435.1 | 0 | 6 | 330 | 1 | 336 | hypothetical protein OsI_33526 [Oryza sativa Indica Group] |
RefSeq | NP_001064567.1 | 0 | 6 | 330 | 1 | 336 | Os10g0407000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151351.1 | 0 | 1 | 330 | 1 | 324 | pectinesterase-1 [Zea mays] |
RefSeq | XP_002283941.1 | 0 | 13 | 330 | 4 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002464636.1 | 0 | 1 | 330 | 57 | 381 | hypothetical protein SORBIDRAFT_01g022290 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 23 | 309 | 11 | 302 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.99993e-41 | 23 | 291 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-26 | 27 | 312 | 41 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 7e-26 | 26 | 303 | 14 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 7e-26 | 26 | 303 | 14 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HX188723 | 239 | 41 | 279 | 0 |
GR994392 | 304 | 18 | 320 | 0 |
DY292729 | 308 | 22 | 327 | 0 |
EG389297 | 240 | 92 | 331 | 0 |
HX188750 | 240 | 92 | 331 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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